RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
TMEM260-208ENST00000555905 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
TMEM260-208ENST00000555905 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 SERPINB2P05120 415 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 CTSWP56202 376 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 ST5P78524 1137 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 RABL6Q3YEC7 729 aaPredicted RBP13.73□□□□□ -0.21
TMEM260-208ENST00000555905 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 EPHA10Q5JZY3 1008 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 CHMP3Q9Y3E7 222 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
TMEM260-208ENST00000555905 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
TMEM260-208ENST00000555905 MMP10P09238 476 aa13.72□□□□□ -0.21
TMEM260-208ENST00000555905 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
TMEM260-208ENST00000555905 DDR1Q08345 913 aa13.72□□□□□ -0.21
TMEM260-208ENST00000555905 SLC10A5Q5PT55 438 aa13.72□□□□□ -0.21
TMEM260-208ENST00000555905 KDM2BQ8NHM5 1336 aa13.71□□□□□ -0.21
TMEM260-208ENST00000555905 R3HDM1Q15032 1099 aaKnown RBP13.71□□□□□ -0.21
TMEM260-208ENST00000555905 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
TMEM260-208ENST00000555905 CSF1RP07333 972 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 CCDC57Q2TAC2 916 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 CCDC152Q4G0S7 254 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
TMEM260-208ENST00000555905 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 ABCC12Q96J65 1359 aa13.7□□□□□ -0.22
TMEM260-208ENST00000555905 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
TMEM260-208ENST00000555905 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
TMEM260-208ENST00000555905 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
TMEM260-208ENST00000555905 RIC1Q4ADV7 1423 aa13.69□□□□□ -0.22
TMEM260-208ENST00000555905 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
TMEM260-208ENST00000555905 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
TMEM260-208ENST00000555905 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
TMEM260-208ENST00000555905 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
TMEM260-208ENST00000555905 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
TMEM260-208ENST00000555905 TAF7LQ5H9L4 462 aa13.68□□□□□ -0.22
TMEM260-208ENST00000555905 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
TMEM260-208ENST00000555905 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
TMEM260-208ENST00000555905 CCDC85AQ96PX6 553 aaPredicted RBP13.68□□□□□ -0.22
TMEM260-208ENST00000555905 GREM2Q9H772 168 aa13.68□□□□□ -0.22
TMEM260-208ENST00000555905 ITGA6P23229 1130 aa13.67□□□□□ -0.22
TMEM260-208ENST00000555905 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMEM260-208ENST00000555905 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
TMEM260-208ENST00000555905 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
TMEM260-208ENST00000555905 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
TMEM260-208ENST00000555905 EXOC6BQ9Y2D4 811 aa13.67□□□□□ -0.22
TMEM260-208ENST00000555905 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
TMEM260-208ENST00000555905 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
TMEM260-208ENST00000555905 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
TMEM260-208ENST00000555905 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
TMEM260-208ENST00000555905 RFX5P48382 616 aaPredicted RBP13.66□□□□□ -0.22
TMEM260-208ENST00000555905 ERC1Q8IUD2 1116 aa13.66□□□□□ -0.22
TMEM260-208ENST00000555905 BRIP1Q9BX63 1249 aa13.66□□□□□ -0.22
TMEM260-208ENST00000555905 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
TMEM260-208ENST00000555905 NOP58Q9Y2X3 529 aaKnown RBP13.66□□□□□ -0.22
TMEM260-208ENST00000555905 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
TMEM260-208ENST00000555905 APBB1O00213 710 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 POLD1P28340 1107 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 PDE6BP35913 854 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 NUCB1Q02818 461 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
TMEM260-208ENST00000555905 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 C3orf67Q6ZVT6 689 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
TMEM260-208ENST00000555905 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
TMEM260-208ENST00000555905 SIL1Q9H173 461 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
TMEM260-208ENST00000555905 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
TMEM260-208ENST00000555905 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
TMEM260-208ENST00000555905 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-208ENST00000555905 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
TMEM260-208ENST00000555905 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
TMEM260-208ENST00000555905 SPEF2Q9C093 1822 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 EYA2O00167 538 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 CIAO1O76071 339 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 IGHMBP2P38935 993 aaKnown RBP13.63□□□□□ -0.23
TMEM260-208ENST00000555905 CRY2Q49AN0 593 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 LDHAL6AQ6ZMR3 332 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 CHD1LQ86WJ1 897 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 SEC31BQ9NQW1 1179 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
TMEM260-208ENST00000555905 KLRG2A4D1S0 409 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-208ENST00000555905 IL15P40933 162 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-208ENST00000555905 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
TMEM260-208ENST00000555905 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
TMEM260-208ENST00000555905 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
TMEM260-208ENST00000555905 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
TMEM260-208ENST00000555905 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
TMEM260-208ENST00000555905 TAF1P21675 1872 aa13.61□□□□□ -0.23
TMEM260-208ENST00000555905 LRP5O75197 1615 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms