RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TMEM92Q6UXU6 159 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 RNF214Q8ND24 703 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 ORAI2Q96SN7 254 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 DDX21Q9NR30 783 aaKnown RBP eCLIP8.38□□□□□ -1.07
TDP1-213ENST00000555880 CCDC171Q6TFL3 1326 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 HEG1Q9ULI3 1381 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 ZNF500O60304 480 aaPredicted RBP8.37□□□□□ -1.07
TDP1-213ENST00000555880 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
TDP1-213ENST00000555880 F13A1P00488 732 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 HOXB3P14651 431 aaPredicted RBP8.37□□□□□ -1.07
TDP1-213ENST00000555880 SYT1P21579 422 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 PSMA5P28066 241 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 HSPA2P54652 639 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 CWF19L2Q2TBE0 894 aaKnown RBP8.37□□□□□ -1.07
TDP1-213ENST00000555880 RNF20Q5VTR2 975 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
TDP1-213ENST00000555880 KRT28Q7Z3Y7 464 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 GDPD2Q9HCC8 539 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 ZKSCAN5Q9Y2L8 839 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 KIF1AQ12756 1690 aa8.37□□□□□ -1.07
TDP1-213ENST00000555880 RRP9O43818 475 aaKnown RBP8.36□□□□□ -1.07
TDP1-213ENST00000555880 TERF1P54274 439 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 EMP3P54852 163 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 PROSER3Q2NL68 480 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 UVSSAQ2YD98 709 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 GLIPR1L2Q4G1C9 344 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 RIC3Q7Z5B4 369 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 CADPS2Q86UW7 1296 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 ZSWIM6Q9HCJ5 1215 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 TAOK2Q9UL54 1235 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 PA2G4Q9UQ80 394 aaKnown RBP8.36□□□□□ -1.07
TDP1-213ENST00000555880 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 UTYO14607 1347 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 TMEM94Q12767 1356 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 ADAMTS7Q9UKP4 1686 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 PDCP20941 246 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 GJB2P29033 226 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
TDP1-213ENST00000555880 PTH1RQ03431 593 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
TDP1-213ENST00000555880 HSP90AA2PQ14568 343 aaPredicted RBP8.36□□□□□ -1.07
TDP1-213ENST00000555880 ANKRD1Q15327 319 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 CCDC83Q8IWF9 413 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 RAPGEF4Q8WZA2 1011 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 KCNB2Q92953 911 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 FSD1Q9BTV5 496 aa8.36□□□□□ -1.07
TDP1-213ENST00000555880 BICC1Q9H694 974 aaKnown RBP8.36□□□□□ -1.07
TDP1-213ENST00000555880 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
TDP1-213ENST00000555880 SCN11AQ9UI33 1791 aa8.35□□□□□ -1.07
TDP1-213ENST00000555880 FIBPO43427 364 aa8.35□□□□□ -1.07
TDP1-213ENST00000555880 NMIQ13287 307 aaPredicted RBP8.35□□□□□ -1.07
TDP1-213ENST00000555880 SUCLG2Q96I99 432 aa8.35□□□□□ -1.07
TDP1-213ENST00000555880 MFRPQ9BY79 579 aa8.35□□□□□ -1.07
TDP1-213ENST00000555880 RBM8AQ9Y5S9 174 aaKnown RBP8.35□□□□□ -1.07
TDP1-213ENST00000555880 RGPD5Q99666 1765 aa8.35□□□□□ -1.07
TDP1-213ENST00000555880 VPS37CA5D8V6 355 aaPredicted RBP8.34□□□□□ -1.07
TDP1-213ENST00000555880 CPA1P15085 419 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 NECTIN1Q15223 517 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 CREB3L3Q68CJ9 461 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 LARP6Q9BRS8 491 aaKnown RBP8.34□□□□□ -1.07
TDP1-213ENST00000555880 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 C5P01031 1676 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 AFDNP55196 1824 aaKnown RBP8.34□□□□□ -1.07
TDP1-213ENST00000555880 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 ADCK5Q3MIX3 580 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 BLOC1S2Q6QNY1 142 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 MAP4K1Q92918 833 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 EAF2Q96CJ1 260 aaPredicted RBP8.34□□□□□ -1.07
TDP1-213ENST00000555880 CCDC8Q9H0W5 538 aaPredicted RBP8.34□□□□□ -1.07
TDP1-213ENST00000555880 SIL1Q9H173 461 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 HMG20BQ9P0W2 317 aa8.34□□□□□ -1.07
TDP1-213ENST00000555880 PRAMEF22A3QJZ6 481 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 NEURL1BA8MQ27 555 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 SLC27A2O14975 620 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 SASH1O94885 1247 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 LARGE1O95461 756 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 MYL6BP14649 208 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 TATP17735 454 aaPredicted RBP8.33□□□□□ -1.08
TDP1-213ENST00000555880 KRT32Q14532 448 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 TPRNQ4KMQ1 711 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
TDP1-213ENST00000555880 TTC5Q8N0Z6 440 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 FAM227BQ96M60 508 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 NLRP2Q9NX02 1062 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 MTMR6Q9Y217 621 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 ERBB3P21860 1342 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 DCCP43146 1447 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 MRC1P22897 1456 aa8.33□□□□□ -1.08
TDP1-213ENST00000555880 KDM4FA0A1W2PPD8 638 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 POTEB3A0JP26 581 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 KRT85P78386 507 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 GCKRQ14397 625 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 PDIA6Q15084 440 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 ME3Q16798 604 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 POTEBQ6S5H4 581 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 NPHP3Q7Z494 1330 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms