RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 RRAGCQ9HB90 399 aa26.23■■□□□ 1.79
VTI1B-205ENST00000555543 BBOX1O75936 387 aa26.22■■□□□ 1.79
VTI1B-205ENST00000555543 IARSP41252 1262 aaKnown RBP26.22■■□□□ 1.79
VTI1B-205ENST00000555543 DNAAF4Q8WXU2 420 aa26.22■■□□□ 1.79
VTI1B-205ENST00000555543 LRRC37AA6NMS7 1700 aa26.22■■□□□ 1.79
VTI1B-205ENST00000555543 CELF1Q92879 486 aaKnown RBP26.21■■□□□ 1.79
VTI1B-205ENST00000555543 CDHR2Q9BYE9 1310 aa26.2■■□□□ 1.79
VTI1B-205ENST00000555543 WDR90Q96KV7 1748 aa26.2■■□□□ 1.79
VTI1B-205ENST00000555543 F6X3S4 739 aa26.19■■□□□ 1.78
VTI1B-205ENST00000555543 GRIPAP1Q4V328 841 aa26.19■■□□□ 1.78
VTI1B-205ENST00000555543 SP8Q8IXZ3 490 aa26.19■■□□□ 1.78
VTI1B-205ENST00000555543 ZNF541Q9H0D2 1346 aa26.18■■□□□ 1.78
VTI1B-205ENST00000555543 POTECB2RU33 542 aa26.18■■□□□ 1.78
VTI1B-205ENST00000555543 PDE8AO60658 829 aa26.18■■□□□ 1.78
VTI1B-205ENST00000555543 DPY19L2Q6NUT2 758 aa26.18■■□□□ 1.78
VTI1B-205ENST00000555543 DUOX1Q9NRD9 1551 aa26.18■■□□□ 1.78
VTI1B-205ENST00000555543 DDNO94850 711 aaPredicted RBP26.17■■□□□ 1.78
VTI1B-205ENST00000555543 SEC31BQ9NQW1 1179 aa26.17■■□□□ 1.78
VTI1B-205ENST00000555543 TOMM70O94826 608 aa26.16■■□□□ 1.78
VTI1B-205ENST00000555543 HSP90B1P14625 803 aaKnown RBP26.16■■□□□ 1.78
VTI1B-205ENST00000555543 GCKRQ14397 625 aa26.16■■□□□ 1.78
VTI1B-205ENST00000555543 TRMT2AQ8IZ69 625 aaKnown RBP26.16■■□□□ 1.78
VTI1B-205ENST00000555543 LINS1Q8NG48 757 aa26.16■■□□□ 1.78
VTI1B-205ENST00000555543 CCDC85AQ96PX6 553 aaPredicted RBP26.16■■□□□ 1.78
VTI1B-205ENST00000555543 TMX4Q9H1E5 349 aaPredicted RBP26.16■■□□□ 1.78
VTI1B-205ENST00000555543 H7C1W4 665 aa26.15■■□□□ 1.78
VTI1B-205ENST00000555543 UBE3BQ7Z3V4 1068 aa26.15■■□□□ 1.78
VTI1B-205ENST00000555543 TMC4Q7Z404 712 aa26.15■■□□□ 1.78
VTI1B-205ENST00000555543 RTFDC1Q9BY42 306 aaPredicted RBP26.15■■□□□ 1.78
VTI1B-205ENST00000555543 FZD9O00144 591 aa26.14■■□□□ 1.78
VTI1B-205ENST00000555543 VEGFAP15692 232 aaPredicted RBP26.14■■□□□ 1.78
VTI1B-205ENST00000555543 CTSWP56202 376 aa26.14■■□□□ 1.78
VTI1B-205ENST00000555543 CCDC152Q4G0S7 254 aa26.14■■□□□ 1.78
VTI1B-205ENST00000555543 DPP8Q6V1X1 898 aaPredicted RBP26.14■■□□□ 1.78
VTI1B-205ENST00000555543 MPNDQ8N594 471 aa26.14■■□□□ 1.78
VTI1B-205ENST00000555543 CASP7P55210 303 aa26.13■■□□□ 1.77
VTI1B-205ENST00000555543 AOC3Q16853 763 aa26.13■■□□□ 1.77
VTI1B-205ENST00000555543 BEND3Q5T5X7 828 aa26.13■■□□□ 1.77
VTI1B-205ENST00000555543 C16orf71Q8IYS4 520 aaPredicted RBP26.13■■□□□ 1.77
VTI1B-205ENST00000555543 LARGE2Q8N3Y3 721 aa26.13■■□□□ 1.77
VTI1B-205ENST00000555543 MYH3P11055 1940 aa26.13■■□□□ 1.77
VTI1B-205ENST00000555543 LTBP1Q14766 1721 aa26.13■■□□□ 1.77
VTI1B-205ENST00000555543 RPS8P62241 208 aaKnown RBP26.12■■□□□ 1.77
VTI1B-205ENST00000555543 MRPL50Q8N5N7 158 aaKnown RBP26.12■■□□□ 1.77
VTI1B-205ENST00000555543 JDP2Q8WYK2 163 aa26.12■■□□□ 1.77
VTI1B-205ENST00000555543 CEP350Q5VT06 3117 aa26.11■■□□□ 1.77
VTI1B-205ENST00000555543 PPIP5K2O43314 1243 aa26.11■■□□□ 1.77
VTI1B-205ENST00000555543 TTLL11Q8NHH1 800 aa26.11■■□□□ 1.77
VTI1B-205ENST00000555543 RBM46Q8TBY0 533 aaKnown RBP26.11■■□□□ 1.77
VTI1B-205ENST00000555543 SSH1Q8WYL5 1049 aa26.11■■□□□ 1.77
VTI1B-205ENST00000555543 SUPT20HQ8NEM7 779 aa26.1■■□□□ 1.77
VTI1B-205ENST00000555543 GPSM2P81274 684 aa26.09■■□□□ 1.77
VTI1B-205ENST00000555543 L3MBTL3Q96JM7 780 aaPredicted RBP26.09■■□□□ 1.77
VTI1B-205ENST00000555543 BCL2L13Q9BXK5 485 aa26.09■■□□□ 1.77
VTI1B-205ENST00000555543 GREM2Q9H772 168 aa26.08■■□□□ 1.77
VTI1B-205ENST00000555543 KIAA2012Q0VF49 1180 aa26.07■■□□□ 1.76
VTI1B-205ENST00000555543 NIM1KQ8IY84 436 aa26.07■■□□□ 1.76
VTI1B-205ENST00000555543 PLA2G12BQ9BX93 195 aa26.07■■□□□ 1.76
VTI1B-205ENST00000555543 VPS33BQ9H267 617 aa26.07■■□□□ 1.76
VTI1B-205ENST00000555543 NSFL1CQ9UNZ2 370 aaKnown RBP26.07■■□□□ 1.76
VTI1B-205ENST00000555543 RTL9Q8NET4 1388 aa26.07■■□□□ 1.76
VTI1B-205ENST00000555543 HSPA6P17066 643 aa26.06■■□□□ 1.76
VTI1B-205ENST00000555543 SLC4A10Q6U841 1118 aa26.06■■□□□ 1.76
VTI1B-205ENST00000555543 SPEF2Q9C093 1822 aa26.06■■□□□ 1.76
VTI1B-205ENST00000555543 GPC2Q8N158 579 aa26.05■■□□□ 1.76
VTI1B-205ENST00000555543 POLLQ9UGP5 575 aa26.05■■□□□ 1.76
VTI1B-205ENST00000555543 SCN4AP35499 1836 aa26.04■■□□□ 1.76
VTI1B-205ENST00000555543 EIF6P56537 245 aaKnown RBP26.04■■□□□ 1.76
VTI1B-205ENST00000555543 ANKRD18AQ8IVF6 992 aa26.04■■□□□ 1.76
VTI1B-205ENST00000555543 GPR101Q96P66 508 aaPredicted RBP26.04■■□□□ 1.76
VTI1B-205ENST00000555543 FAM161AQ3B820 660 aa26.03■■□□□ 1.76
VTI1B-205ENST00000555543 ALDH1L2Q3SY69 923 aa26.03■■□□□ 1.76
VTI1B-205ENST00000555543 CDC5LQ99459 802 aaKnown RBP26.03■■□□□ 1.76
VTI1B-205ENST00000555543 GJA3Q9Y6H8 435 aa26.03■■□□□ 1.76
VTI1B-205ENST00000555543 ALDH1L1O75891 902 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 CSF1RP07333 972 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 POTEIP0CG38 1075 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 POTEJP0CG39 1038 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 FSTL1Q12841 308 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 SMC1BQ8NDV3 1235 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 TBC1D16Q8TBP0 767 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 SRCIN1Q9C0H9 1055 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 ZNRF3Q9ULT6 936 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 PTPRCP08575 1304 aa26.02■■□□□ 1.76
VTI1B-205ENST00000555543 IQCA1LA6NCM1 817 aa26.01■■□□□ 1.75
VTI1B-205ENST00000555543 C6orf229H3BNL8 230 aa26.01■■□□□ 1.75
VTI1B-205ENST00000555543 GRM8O00222 908 aa26.01■■□□□ 1.75
VTI1B-205ENST00000555543 TAF1DQ9H5J8 278 aaPredicted RBP26.01■■□□□ 1.75
VTI1B-205ENST00000555543 SMC4Q9NTJ3 1288 aa26.01■■□□□ 1.75
VTI1B-205ENST00000555543 PODXL2Q9NZ53 605 aa26.01■■□□□ 1.75
VTI1B-205ENST00000555543 CT47B1P0C2W7 299 aaPredicted RBP26■■□□□ 1.75
VTI1B-205ENST00000555543 ITGA6P23229 1130 aa26■■□□□ 1.75
VTI1B-205ENST00000555543 FOXO4P98177 505 aa26■■□□□ 1.75
VTI1B-205ENST00000555543 HNRNPUQ00839 825 aaKnown RBP eCLIP26■■□□□ 1.75
VTI1B-205ENST00000555543 WASHC4Q2M389 1173 aa26■■□□□ 1.75
VTI1B-205ENST00000555543 YDJCA8MPS7 323 aa25.99■■□□□ 1.75
VTI1B-205ENST00000555543 RIMBP2O15034 1052 aa25.99■■□□□ 1.75
VTI1B-205ENST00000555543 UFL1O94874 794 aa25.99■■□□□ 1.75
VTI1B-205ENST00000555543 CXCL9Q07325 125 aa25.99■■□□□ 1.75
VTI1B-205ENST00000555543 EPHA10Q5JZY3 1008 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms