RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 GAS2L3Q86XJ1 694 aa29.2■■■□□ 2.26
TMEM260-207ENST00000555497 EYA2O00167 538 aa29.19■■■□□ 2.26
TMEM260-207ENST00000555497 EXOC5O00471 708 aa29.19■■■□□ 2.26
TMEM260-207ENST00000555497 LARGE1O95461 756 aa29.19■■■□□ 2.26
TMEM260-207ENST00000555497 IL15P40933 162 aaPredicted RBP29.19■■■□□ 2.26
TMEM260-207ENST00000555497 KCNJ4P48050 445 aa29.18■■■□□ 2.26
TMEM260-207ENST00000555497 KIF6Q6ZMV9 814 aa29.18■■■□□ 2.26
TMEM260-207ENST00000555497 TAF6LQ9Y6J9 622 aa29.18■■■□□ 2.26
TMEM260-207ENST00000555497 NEUROD6Q96NK8 337 aa29.18■■■□□ 2.26
TMEM260-207ENST00000555497 PDRG1Q9NUG6 133 aa29.18■■■□□ 2.26
TMEM260-207ENST00000555497 JCADQ9P266 1359 aa29.18■■■□□ 2.26
TMEM260-207ENST00000555497 CYP19A1P11511 503 aaPredicted RBP29.17■■■□□ 2.26
TMEM260-207ENST00000555497 HLFQ16534 295 aa29.17■■■□□ 2.26
TMEM260-207ENST00000555497 VPS53Q5VIR6 699 aa29.17■■■□□ 2.26
TMEM260-207ENST00000555497 FAM89AQ96GI7 184 aa29.17■■■□□ 2.26
TMEM260-207ENST00000555497 GPR108Q9NPR9 543 aa29.17■■■□□ 2.26
TMEM260-207ENST00000555497 PRPF40AO75400 957 aaKnown RBP29.17■■■□□ 2.26
TMEM260-207ENST00000555497 MAP3K15Q6ZN16 1313 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 LRP6O75581 1613 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 TAF5LO75529 589 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 ZKSCAN1P17029 563 aaPredicted RBP29.16■■■□□ 2.26
TMEM260-207ENST00000555497 DDX46Q7L014 1031 aaKnown RBP29.16■■■□□ 2.26
TMEM260-207ENST00000555497 CYP46A1Q9Y6A2 500 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 WNK3Q9BYP7 1800 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 ZNF609O15014 1411 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 SYNE4Q8N205 404 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 SYTL4Q96C24 671 aaPredicted RBP29.16■■■□□ 2.26
TMEM260-207ENST00000555497 PANK2Q9BZ23 570 aa29.16■■■□□ 2.26
TMEM260-207ENST00000555497 RPAP1Q9BWH6 1393 aaPredicted RBP29.15■■■□□ 2.26
TMEM260-207ENST00000555497 PCCAP05165 728 aaPredicted RBP29.15■■■□□ 2.26
TMEM260-207ENST00000555497 CIAO1O76071 339 aa29.14■■■□□ 2.26
TMEM260-207ENST00000555497 GIGYF2Q6Y7W6 1299 aaKnown RBP29.14■■■□□ 2.26
TMEM260-207ENST00000555497 SEC62Q99442 399 aaKnown RBP29.14■■■□□ 2.26
TMEM260-207ENST00000555497 PRIM1P49642 420 aaKnown RBP29.13■■■□□ 2.25
TMEM260-207ENST00000555497 CCDC129Q6ZRS4 1044 aa29.13■■■□□ 2.25
TMEM260-207ENST00000555497 CCDC85AQ96PX6 553 aaPredicted RBP29.13■■■□□ 2.25
TMEM260-207ENST00000555497 ADAMTS2O95450 1211 aa29.13■■■□□ 2.25
TMEM260-207ENST00000555497 ZBTB1Q9Y2K1 713 aa29.13■■■□□ 2.25
TMEM260-207ENST00000555497 RFX7Q2KHR2 1363 aa29.12■■■□□ 2.25
TMEM260-207ENST00000555497 GPTP24298 496 aa29.12■■■□□ 2.25
TMEM260-207ENST00000555497 ZBTB38Q8NAP3 1195 aaPredicted RBP29.12■■■□□ 2.25
TMEM260-207ENST00000555497 MRE11P49959 708 aa29.12■■■□□ 2.25
TMEM260-207ENST00000555497 GPT2Q8TD30 523 aa29.12■■■□□ 2.25
TMEM260-207ENST00000555497 GRPEL1Q9HAV7 217 aa29.12■■■□□ 2.25
TMEM260-207ENST00000555497 RTN4Q9NQC3 1192 aaKnown RBP29.12■■■□□ 2.25
TMEM260-207ENST00000555497 A0A1B0GUL7 405 aa29.11■■■□□ 2.25
TMEM260-207ENST00000555497 CCDC57Q2TAC2 916 aa29.11■■■□□ 2.25
TMEM260-207ENST00000555497 KBTBD3Q8NAB2 608 aa29.11■■■□□ 2.25
TMEM260-207ENST00000555497 PLA2G12BQ9BX93 195 aa29.11■■■□□ 2.25
TMEM260-207ENST00000555497 DTNBO60941 627 aa29.1■■■□□ 2.25
TMEM260-207ENST00000555497 ST3GAL1Q11201 340 aa29.1■■■□□ 2.25
TMEM260-207ENST00000555497 SLFNL1Q499Z3 407 aa29.1■■■□□ 2.25
TMEM260-207ENST00000555497 USPL1Q5W0Q7 1092 aa29.1■■■□□ 2.25
TMEM260-207ENST00000555497 ANO8Q9HCE9 1232 aaPredicted RBP29.1■■■□□ 2.25
TMEM260-207ENST00000555497 CSF1RP07333 972 aa29.1■■■□□ 2.25
TMEM260-207ENST00000555497 LTBP4Q8N2S1 1624 aa29.09■■■□□ 2.25
TMEM260-207ENST00000555497 DOT1LQ8TEK3 1739 aa29.09■■■□□ 2.25
TMEM260-207ENST00000555497 GOLIM4O00461 696 aa29.09■■■□□ 2.25
TMEM260-207ENST00000555497 NCLP19338 710 aaKnown RBP29.09■■■□□ 2.25
TMEM260-207ENST00000555497 NLRP10Q86W26 655 aa29.09■■■□□ 2.25
TMEM260-207ENST00000555497 CCDC83Q8IWF9 413 aa29.09■■■□□ 2.25
TMEM260-207ENST00000555497 PAG1Q9NWQ8 432 aa29.09■■■□□ 2.25
TMEM260-207ENST00000555497 ISY1Q9ULR0 285 aaKnown RBP29.09■■■□□ 2.25
TMEM260-207ENST00000555497 ME3Q16798 604 aa29.08■■■□□ 2.25
TMEM260-207ENST00000555497 RNF20Q5VTR2 975 aa29.08■■■□□ 2.25
TMEM260-207ENST00000555497 CAVIN1Q6NZI2 390 aaKnown RBP29.08■■■□□ 2.25
TMEM260-207ENST00000555497 WDR33Q9C0J8 1336 aaKnown RBP29.08■■■□□ 2.25
TMEM260-207ENST00000555497 MCMDC2Q4G0Z9 681 aa29.08■■■□□ 2.25
TMEM260-207ENST00000555497 CEP126Q9P2H0 1117 aa29.08■■■□□ 2.25
TMEM260-207ENST00000555497 SPATA31A1Q5TZJ5 1347 aa29.07■■■□□ 2.24
TMEM260-207ENST00000555497 PSMA5P28066 241 aa29.07■■■□□ 2.24
TMEM260-207ENST00000555497 TSGA10IPQ3SY00 556 aa29.07■■■□□ 2.24
TMEM260-207ENST00000555497 TCEANC2Q96MN5 208 aa29.07■■■□□ 2.24
TMEM260-207ENST00000555497 TPCN1Q9ULQ1 816 aa29.07■■■□□ 2.24
TMEM260-207ENST00000555497 NSFL1CQ9UNZ2 370 aaKnown RBP29.07■■■□□ 2.24
TMEM260-207ENST00000555497 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.07■■■□□ 2.24
TMEM260-207ENST00000555497 PALLDQ8WX93 1383 aa29.07■■■□□ 2.24
TMEM260-207ENST00000555497 ZSCAN31Q96LW9 406 aaPredicted RBP29.06■■■□□ 2.24
TMEM260-207ENST00000555497 NRAPQ86VF7 1730 aa29.06■■■□□ 2.24
TMEM260-207ENST00000555497 FOXD4L6Q3SYB3 417 aaPredicted RBP29.06■■■□□ 2.24
TMEM260-207ENST00000555497 FOXD4L3Q6VB84 417 aaPredicted RBP29.06■■■□□ 2.24
TMEM260-207ENST00000555497 HMG20BQ9P0W2 317 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 SMC3Q9UQE7 1217 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 NUP98P52948 1817 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 TCHHQ07283 1943 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 ANKRD36CQ5JPF3 1778 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 ADORA1P30542 326 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 BLOC1S2Q6QNY1 142 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 NECAB1Q8N987 351 aa29.05■■■□□ 2.24
TMEM260-207ENST00000555497 SH2B1Q9NRF2 756 aaPredicted RBP29.05■■■□□ 2.24
TMEM260-207ENST00000555497 CDHR2Q9BYE9 1310 aa29.04■■■□□ 2.24
TMEM260-207ENST00000555497 PHLPP1O60346 1717 aa29.04■■■□□ 2.24
TMEM260-207ENST00000555497 IFIT1P09914 478 aaKnown RBP29.04■■■□□ 2.24
TMEM260-207ENST00000555497 SYT1P21579 422 aa29.04■■■□□ 2.24
TMEM260-207ENST00000555497 RPS6KB1P23443 525 aa29.04■■■□□ 2.24
TMEM260-207ENST00000555497 RBM27Q9P2N5 1060 aaKnown RBP29.04■■■□□ 2.24
TMEM260-207ENST00000555497 TBC1D2BQ9UPU7 963 aa29.04■■■□□ 2.24
TMEM260-207ENST00000555497 SH3TC1Q8TE82 1336 aa29.04■■■□□ 2.24
TMEM260-207ENST00000555497 IFIT5Q13325 482 aaKnown RBP29.03■■■□□ 2.24
TMEM260-207ENST00000555497 FBXO3Q9UK99 471 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms