RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 DHX32Q7L7V1 743 aaKnown RBP10.43□□□□□ -0.74
VRK1-205ENST00000555402 SLC51AQ86UW1 340 aa10.43□□□□□ -0.74
VRK1-205ENST00000555402 TRPM4Q8TD43 1214 aa10.43□□□□□ -0.74
VRK1-205ENST00000555402 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
VRK1-205ENST00000555402 DEAF1O75398 565 aaPredicted RBP10.42□□□□□ -0.74
VRK1-205ENST00000555402 EPB42P16452 691 aa10.42□□□□□ -0.74
VRK1-205ENST00000555402 HDGFL1Q5TGJ6 251 aa10.42□□□□□ -0.74
VRK1-205ENST00000555402 INPP5BP32019 993 aa10.41□□□□□ -0.74
VRK1-205ENST00000555402 MLLT1Q03111 559 aaPredicted RBP10.41□□□□□ -0.74
VRK1-205ENST00000555402 KRT25Q7Z3Z0 450 aa10.41□□□□□ -0.74
VRK1-205ENST00000555402 DZIP1LQ8IYY4 767 aaKnown RBP10.41□□□□□ -0.74
VRK1-205ENST00000555402 KRTAP4-8A0A0G2JLE6 195 aa10.4□□□□□ -0.74
VRK1-205ENST00000555402 TARSP26639 723 aaKnown RBP10.4□□□□□ -0.74
VRK1-205ENST00000555402 IFT43Q96FT9 208 aa10.4□□□□□ -0.74
VRK1-205ENST00000555402 ZMYND15Q9H091 742 aa10.4□□□□□ -0.74
VRK1-205ENST00000555402 DLL1O00548 723 aa10.39□□□□□ -0.75
VRK1-205ENST00000555402 FSTP19883 344 aa10.39□□□□□ -0.75
VRK1-205ENST00000555402 SSTR4P31391 388 aa10.39□□□□□ -0.75
VRK1-205ENST00000555402 IDH3AP50213 366 aa10.39□□□□□ -0.75
VRK1-205ENST00000555402 SEC13P55735 322 aa10.39□□□□□ -0.75
VRK1-205ENST00000555402 AKTIPQ9H8T0 292 aa10.39□□□□□ -0.75
VRK1-205ENST00000555402 PAX4O43316 350 aa10.38□□□□□ -0.75
VRK1-205ENST00000555402 RAD21O60216 631 aa10.38□□□□□ -0.75
VRK1-205ENST00000555402 GPLD1P80108 840 aa10.38□□□□□ -0.75
VRK1-205ENST00000555402 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
VRK1-205ENST00000555402 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
VRK1-205ENST00000555402 SASH3O75995 380 aa10.37□□□□□ -0.75
VRK1-205ENST00000555402 ALX3O95076 343 aa10.37□□□□□ -0.75
VRK1-205ENST00000555402 RASA1P20936 1047 aa10.37□□□□□ -0.75
VRK1-205ENST00000555402 FLIIQ13045 1269 aa10.37□□□□□ -0.75
VRK1-205ENST00000555402 TMEM130Q8N3G9 435 aa10.37□□□□□ -0.75
VRK1-205ENST00000555402 HINFPQ9BQA5 517 aa10.37□□□□□ -0.75
VRK1-205ENST00000555402 RARAP10276 462 aa10.36□□□□□ -0.75
VRK1-205ENST00000555402 HFE2Q6ZVN8 426 aa10.36□□□□□ -0.75
VRK1-205ENST00000555402 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
VRK1-205ENST00000555402 CD97P48960 835 aa10.35□□□□□ -0.75
VRK1-205ENST00000555402 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
VRK1-205ENST00000555402 TXKP42681 527 aa10.34□□□□□ -0.75
VRK1-205ENST00000555402 ARSDP51689 593 aa10.34□□□□□ -0.75
VRK1-205ENST00000555402 ARXQ96QS3 562 aa10.34□□□□□ -0.75
VRK1-205ENST00000555402 F8W735 103 aaPredicted RBP10.33□□□□□ -0.76
VRK1-205ENST00000555402 IGFBP4P22692 258 aa10.33□□□□□ -0.76
VRK1-205ENST00000555402 ARID4AP29374 1257 aaPredicted RBP10.33□□□□□ -0.76
VRK1-205ENST00000555402 NRLP54845 237 aa10.33□□□□□ -0.76
VRK1-205ENST00000555402 LGR5O75473 907 aa10.32□□□□□ -0.76
VRK1-205ENST00000555402 EIF2AK2P19525 551 aaKnown RBP10.32□□□□□ -0.76
VRK1-205ENST00000555402 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
VRK1-205ENST00000555402 MICAL2O94851 1124 aa10.31□□□□□ -0.76
VRK1-205ENST00000555402 DGKZQ13574 1117 aa10.31□□□□□ -0.76
VRK1-205ENST00000555402 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
VRK1-205ENST00000555402 IRAK1P51617 712 aa10.3□□□□□ -0.76
VRK1-205ENST00000555402 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
VRK1-205ENST00000555402 IL22RA1Q8N6P7 574 aa10.29□□□□□ -0.76
VRK1-205ENST00000555402 PLD4Q96BZ4 506 aa10.29□□□□□ -0.76
VRK1-205ENST00000555402 TFIP11Q9UBB9 837 aaKnown RBP10.29□□□□□ -0.76
VRK1-205ENST00000555402 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
VRK1-205ENST00000555402 J3QW42 95 aa10.28□□□□□ -0.76
VRK1-205ENST00000555402 PTCD1O75127 700 aaKnown RBP10.28□□□□□ -0.76
VRK1-205ENST00000555402 MED26O95402 600 aa10.28□□□□□ -0.76
VRK1-205ENST00000555402 SIK1P57059 783 aa10.28□□□□□ -0.76
VRK1-205ENST00000555402 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
VRK1-205ENST00000555402 Q6ZS46 218 aa10.28□□□□□ -0.76
VRK1-205ENST00000555402 QTRT2Q9H974 415 aaKnown RBP10.28□□□□□ -0.76
VRK1-205ENST00000555402 SRA1Q9HD15 236 aaKnown RBP10.28□□□□□ -0.76
VRK1-205ENST00000555402 RAXQ9Y2V3 346 aa10.28□□□□□ -0.76
VRK1-205ENST00000555402 OPLAHO14841 1288 aa10.27□□□□□ -0.77
VRK1-205ENST00000555402 EGFRP00533 1210 aa10.27□□□□□ -0.77
VRK1-205ENST00000555402 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
VRK1-205ENST00000555402 DPYDQ12882 1025 aa10.27□□□□□ -0.77
VRK1-205ENST00000555402 SETDB1Q15047 1291 aa10.27□□□□□ -0.77
VRK1-205ENST00000555402 C11orf91Q3C1V1 193 aa10.27□□□□□ -0.77
VRK1-205ENST00000555402 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.77
VRK1-205ENST00000555402 GSC2O15499 205 aa10.26□□□□□ -0.77
VRK1-205ENST00000555402 COBLO75128 1261 aa10.26□□□□□ -0.77
VRK1-205ENST00000555402 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
VRK1-205ENST00000555402 YBX3P16989 372 aaKnown RBP eCLIP10.26□□□□□ -0.77
VRK1-205ENST00000555402 AGGF1Q8N302 714 aaeCLIP10.26□□□□□ -0.77
VRK1-205ENST00000555402 DCAF11Q8TEB1 546 aa10.26□□□□□ -0.77
VRK1-205ENST00000555402 USP20Q9Y2K6 914 aa10.26□□□□□ -0.77
VRK1-205ENST00000555402 MAFBQ9Y5Q3 323 aaPredicted RBP10.26□□□□□ -0.77
VRK1-205ENST00000555402 KIAA1324LA8MWY0 1029 aaPredicted RBP10.25□□□□□ -0.77
VRK1-205ENST00000555402 GLB1P16278 677 aa10.25□□□□□ -0.77
VRK1-205ENST00000555402 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
VRK1-205ENST00000555402 PTK7Q13308 1070 aa10.25□□□□□ -0.77
VRK1-205ENST00000555402 CRTC2Q53ET0 693 aaPredicted RBP10.25□□□□□ -0.77
VRK1-205ENST00000555402 MAP4K3Q8IVH8 894 aa10.25□□□□□ -0.77
VRK1-205ENST00000555402 HOMEZQ8IX15 550 aa10.25□□□□□ -0.77
VRK1-205ENST00000555402 OAS3Q9Y6K5 1087 aaKnown RBP10.25□□□□□ -0.77
VRK1-205ENST00000555402 XYLBO75191 536 aa10.24□□□□□ -0.77
VRK1-205ENST00000555402 TGFB1P01137 390 aa10.24□□□□□ -0.77
VRK1-205ENST00000555402 GHRHP01286 108 aa10.24□□□□□ -0.77
VRK1-205ENST00000555402 PSAPP07602 524 aa10.24□□□□□ -0.77
VRK1-205ENST00000555402 GP2P55259 537 aaKnown RBP10.24□□□□□ -0.77
VRK1-205ENST00000555402 UBL7Q96S82 380 aaPredicted RBP10.24□□□□□ -0.77
VRK1-205ENST00000555402 STOML1Q9UBI4 398 aa10.24□□□□□ -0.77
VRK1-205ENST00000555402 MYO19Q96H55 970 aa10.23□□□□□ -0.77
VRK1-205ENST00000555402 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.22□□□□□ -0.77
VRK1-205ENST00000555402 CMTR1Q8N1G2 835 aaKnown RBP10.22□□□□□ -0.77
VRK1-205ENST00000555402 NSUN5Q96P11 429 aaKnown RBP10.22□□□□□ -0.77
VRK1-205ENST00000555402 RBSNQ9H1K0 784 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms