RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 NIM1KQ8IY84 436 aa28.63■■■□□ 2.17
COCH-208ENST00000555117 LTBP1Q14766 1721 aa28.63■■■□□ 2.17
COCH-208ENST00000555117 AOC3Q16853 763 aa28.62■■■□□ 2.17
COCH-208ENST00000555117 SUPT20HQ8NEM7 779 aa28.62■■■□□ 2.17
COCH-208ENST00000555117 TRIM28Q13263 835 aaKnown RBP28.61■■■□□ 2.17
COCH-208ENST00000555117 DPP8Q6V1X1 898 aaPredicted RBP28.61■■■□□ 2.17
COCH-208ENST00000555117 RTFDC1Q9BY42 306 aaPredicted RBP28.61■■■□□ 2.17
COCH-208ENST00000555117 VPS33BQ9H267 617 aa28.61■■■□□ 2.17
COCH-208ENST00000555117 RTL5Q5HYW3 569 aaPredicted RBP28.6■■■□□ 2.17
COCH-208ENST00000555117 MPNDQ8N594 471 aa28.6■■■□□ 2.17
COCH-208ENST00000555117 CLEC11AQ9Y240 323 aa28.6■■■□□ 2.17
COCH-208ENST00000555117 CCDC30Q5VVM6 783 aa28.59■■■□□ 2.17
COCH-208ENST00000555117 PNMA8AQ86V59 439 aaPredicted RBP28.59■■■□□ 2.17
COCH-208ENST00000555117 TSR2Q969E8 191 aaKnown RBP28.59■■■□□ 2.17
COCH-208ENST00000555117 SF3B3Q15393 1217 aaKnown RBP28.58■■■□□ 2.17
COCH-208ENST00000555117 TSPYL6Q8N831 410 aa28.58■■■□□ 2.17
COCH-208ENST00000555117 CHMP4AQ9BY43 222 aa28.58■■■□□ 2.17
COCH-208ENST00000555117 CREBZFQ9NS37 354 aa28.58■■■□□ 2.17
COCH-208ENST00000555117 PASKQ96RG2 1323 aa28.58■■■□□ 2.17
COCH-208ENST00000555117 DUOX1Q9NRD9 1551 aa28.58■■■□□ 2.17
COCH-208ENST00000555117 COL4A1P02462 1669 aa28.58■■■□□ 2.16
COCH-208ENST00000555117 LMOD1P29536 600 aaPredicted RBP28.57■■■□□ 2.16
COCH-208ENST00000555117 TMC4Q7Z404 712 aa28.57■■■□□ 2.16
COCH-208ENST00000555117 MYD88Q99836 296 aa28.57■■■□□ 2.16
COCH-208ENST00000555117 IRS4O14654 1257 aaPredicted RBP28.56■■■□□ 2.16
COCH-208ENST00000555117 SALL2Q9Y467 1007 aaPredicted RBP28.56■■■□□ 2.16
COCH-208ENST00000555117 PCNTO95613 3336 aa28.55■■■□□ 2.16
COCH-208ENST00000555117 IL16Q14005 1332 aa28.55■■■□□ 2.16
COCH-208ENST00000555117 SCNN1DP51172 638 aa28.55■■■□□ 2.16
COCH-208ENST00000555117 ZBTB38Q8NAP3 1195 aaPredicted RBP28.55■■■□□ 2.16
COCH-208ENST00000555117 CELF1Q92879 486 aaKnown RBP28.55■■■□□ 2.16
COCH-208ENST00000555117 ZNF521Q96K83 1311 aa28.54■■■□□ 2.16
COCH-208ENST00000555117 DDX58O95786 925 aaKnown RBP28.54■■■□□ 2.16
COCH-208ENST00000555117 ITGBL1O95965 494 aaPredicted RBP28.54■■■□□ 2.16
COCH-208ENST00000555117 KIAA2012Q0VF49 1180 aa28.54■■■□□ 2.16
COCH-208ENST00000555117 ZNRF3Q9ULT6 936 aa28.54■■■□□ 2.16
COCH-208ENST00000555117 IFFO2Q5TF58 517 aa28.53■■■□□ 2.16
COCH-208ENST00000555117 WDR63Q8IWG1 891 aa28.53■■■□□ 2.16
COCH-208ENST00000555117 EPS15P42566 896 aa28.52■■■□□ 2.16
COCH-208ENST00000555117 MAP1SQ66K74 1059 aaPredicted RBP28.52■■■□□ 2.16
COCH-208ENST00000555117 CCDC191Q8NCU4 936 aa28.52■■■□□ 2.16
COCH-208ENST00000555117 CXCL9Q07325 125 aa28.51■■■□□ 2.15
COCH-208ENST00000555117 METTL22Q9BUU2 404 aaPredicted RBP28.51■■■□□ 2.15
COCH-208ENST00000555117 CNTROBQ8N137 903 aa28.5■■■□□ 2.15
COCH-208ENST00000555117 CWC25Q9NXE8 425 aaPredicted RBP28.5■■■□□ 2.15
COCH-208ENST00000555117 MKRN1Q9UHC7 482 aaKnown RBP28.5■■■□□ 2.15
COCH-208ENST00000555117 PCCAP05165 728 aaPredicted RBP28.49■■■□□ 2.15
COCH-208ENST00000555117 HSP90B1P14625 803 aaKnown RBP28.49■■■□□ 2.15
COCH-208ENST00000555117 TWISTNBQ3B726 338 aaPredicted RBP28.49■■■□□ 2.15
COCH-208ENST00000555117 STK31Q9BXU1 1019 aa28.49■■■□□ 2.15
COCH-208ENST00000555117 MAP3K2Q9Y2U5 619 aa28.49■■■□□ 2.15
COCH-208ENST00000555117 NSFL1CQ9UNZ2 370 aaKnown RBP28.48■■■□□ 2.15
COCH-208ENST00000555117 TMEM88BA6NKF7 163 aa28.47■■■□□ 2.15
COCH-208ENST00000555117 CIAPIN1Q6FI81 312 aa28.47■■■□□ 2.15
COCH-208ENST00000555117 USP50Q70EL3 339 aaPredicted RBP28.47■■■□□ 2.15
COCH-208ENST00000555117 SPINK5Q9NQ38 1064 aaPredicted RBP28.47■■■□□ 2.15
COCH-208ENST00000555117 GPRC5DQ9NZD1 345 aa28.47■■■□□ 2.15
COCH-208ENST00000555117 MYH3P11055 1940 aa28.46■■■□□ 2.15
COCH-208ENST00000555117 PI4KAP2A4QPH2 592 aa28.46■■■□□ 2.15
COCH-208ENST00000555117 KSR2Q6VAB6 950 aa28.46■■■□□ 2.15
COCH-208ENST00000555117 PI4KAP1Q8N8J0 262 aa28.46■■■□□ 2.15
COCH-208ENST00000555117 JARID2Q92833 1246 aaPredicted RBP28.46■■■□□ 2.15
COCH-208ENST00000555117 CACNA1FO60840 1977 aa28.45■■■□□ 2.14
COCH-208ENST00000555117 RAD17O75943 681 aa28.45■■■□□ 2.14
COCH-208ENST00000555117 RPS8P62241 208 aaKnown RBP28.45■■■□□ 2.14
COCH-208ENST00000555117 GPSM2P81274 684 aa28.45■■■□□ 2.14
COCH-208ENST00000555117 ADARB2Q9NS39 739 aaKnown RBP28.45■■■□□ 2.14
COCH-208ENST00000555117 CNTNAP1P78357 1384 aa28.45■■■□□ 2.14
COCH-208ENST00000555117 PDE8AO60658 829 aa28.44■■■□□ 2.14
COCH-208ENST00000555117 HSPA1AP0DMV8 641 aaKnown RBP28.44■■■□□ 2.14
COCH-208ENST00000555117 HSPA1BP0DMV9 641 aaKnown RBP28.44■■■□□ 2.14
COCH-208ENST00000555117 GMPSP49915 693 aaPredicted RBP28.44■■■□□ 2.14
COCH-208ENST00000555117 TNIP1Q15025 636 aa28.44■■■□□ 2.14
COCH-208ENST00000555117 WASHC4Q2M389 1173 aa28.44■■■□□ 2.14
COCH-208ENST00000555117 SEC31BQ9NQW1 1179 aa28.44■■■□□ 2.14
COCH-208ENST00000555117 FANCIQ9NVI1 1328 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 TRPM7Q96QT4 1865 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 YDJCA8MPS7 323 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 C6orf229H3BNL8 230 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 CCDC152Q4G0S7 254 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 POLLQ9UGP5 575 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 CDHR2Q9BYE9 1310 aa28.43■■■□□ 2.14
COCH-208ENST00000555117 IGKV5-2P06315 115 aa28.42■■■□□ 2.14
COCH-208ENST00000555117 G2E3Q7L622 706 aa28.42■■■□□ 2.14
COCH-208ENST00000555117 RIMBP2O15034 1052 aa28.41■■■□□ 2.14
COCH-208ENST00000555117 SLC4A2P04920 1241 aa28.41■■■□□ 2.14
COCH-208ENST00000555117 NEXNQ0ZGT2 675 aa28.41■■■□□ 2.14
COCH-208ENST00000555117 CCDC85AQ96PX6 553 aaPredicted RBP28.41■■■□□ 2.14
COCH-208ENST00000555117 BCL2L13Q9BXK5 485 aa28.41■■■□□ 2.14
COCH-208ENST00000555117 SPEF2Q9C093 1822 aa28.41■■■□□ 2.14
COCH-208ENST00000555117 EYA3Q99504 573 aa28.4■■■□□ 2.14
COCH-208ENST00000555117 DBNDD1Q9H9R9 158 aa28.4■■■□□ 2.14
COCH-208ENST00000555117 TBC1D16Q8TBP0 767 aa28.39■■■□□ 2.14
COCH-208ENST00000555117 CWF19L2Q2TBE0 894 aaKnown RBP28.38■■■□□ 2.13
COCH-208ENST00000555117 GPR101Q96P66 508 aaPredicted RBP28.38■■■□□ 2.13
COCH-208ENST00000555117 PODXL2Q9NZ53 605 aa28.37■■■□□ 2.13
COCH-208ENST00000555117 NEURL1BA8MQ27 555 aa28.36■■■□□ 2.13
COCH-208ENST00000555117 CTSWP56202 376 aa28.36■■■□□ 2.13
COCH-208ENST00000555117 FMR1Q06787 632 aaKnown RBP eCLIP28.36■■■□□ 2.13
COCH-208ENST00000555117 FLIIQ13045 1269 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms