RNA–Protein interactions for RNA: ENST00000555010.1

FOXN3-207, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-207ENST00000555010 ATP1A2P50993 1020 aa4.55□□□□□ -1.68
FOXN3-207ENST00000555010 CRTC2Q53ET0 693 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 KANK4Q5T7N3 995 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 ZNF772Q68DY9 489 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 LARP1Q6PKG0 1096 aaKnown RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 NPAS3Q8IXF0 933 aa4.55□□□□□ -1.68
FOXN3-207ENST00000555010 TSEN2Q8NCE0 465 aaKnown RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 RHBDD1Q8TEB9 315 aa4.55□□□□□ -1.68
FOXN3-207ENST00000555010 SLC4A9Q96Q91 983 aa4.55□□□□□ -1.68
FOXN3-207ENST00000555010 HINFPQ9BQA5 517 aa4.55□□□□□ -1.68
FOXN3-207ENST00000555010 COL25A1Q9BXS0 654 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 DYRK1BQ9Y463 629 aa4.55□□□□□ -1.68
FOXN3-207ENST00000555010 NKTRP30414 1462 aaKnown RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-207ENST00000555010 SPATA31A6Q5VVP1 1343 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 CDK2AP1O14519 115 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 F11P03951 625 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 MSX1P28360 303 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 RXRBP28702 533 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 KRT76Q01546 638 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 DPYDQ12882 1025 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 RNFT1Q5M7Z0 435 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 SH3PXD2AQ5TCZ1 1133 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 GTPBP3Q969Y2 492 aaKnown RBP4.54□□□□□ -1.68
FOXN3-207ENST00000555010 SLC26A8Q96RN1 970 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 RBM19Q9Y4C8 960 aaKnown RBP4.54□□□□□ -1.68
FOXN3-207ENST00000555010 EID1Q9Y6B2 187 aa4.54□□□□□ -1.68
FOXN3-207ENST00000555010 SETBP1Q9Y6X0 1596 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 EFCAB6Q5THR3 1501 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.53□□□□□ -1.68
FOXN3-207ENST00000555010 DKK1O94907 266 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 IDI1Q13907 227 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 MTFR1Q15390 333 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 SLC9A9Q8IVB4 645 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 LARGE2Q8N3Y3 721 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 ZNF837Q96EG3 531 aaPredicted RBP4.53□□□□□ -1.68
FOXN3-207ENST00000555010 NIFKQ9BYG3 293 aaKnown RBP4.53□□□□□ -1.68
FOXN3-207ENST00000555010 TSPAN10Q9H1Z9 355 aaPredicted RBP4.53□□□□□ -1.68
FOXN3-207ENST00000555010 C1orf115Q9H7X2 142 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 SCHIP1Q9P0W5 487 aaPredicted RBP4.53□□□□□ -1.68
FOXN3-207ENST00000555010 ZNF232Q9UNY5 417 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 IQSEC3Q9UPP2 1182 aaPredicted RBP4.53□□□□□ -1.68
FOXN3-207ENST00000555010 HCN4Q9Y3Q4 1203 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 RGS12O14924 1447 aa4.53□□□□□ -1.68
FOXN3-207ENST00000555010 MSH6P52701 1360 aa4.53□□□□□ -1.69
FOXN3-207ENST00000555010 A0A1B0GTH6 734 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L15C9J2P7 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L10C9JJH3 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L13C9JLJ4 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L12C9JPN9 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L11C9JVI0 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L21D6R901 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L18D6R9N7 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L22D6RA61 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L17D6RBQ6 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L19D6RCP7 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L20D6RJB6 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 THBS1P07996 1170 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 TSPY4P0CV99 314 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 TSPY10P0CW01 314 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 CSB-PGBD3P0DP91 1061 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 VSIG8P0DPA2 414 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 TXLNAP40222 546 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 SEC13P55735 322 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 USP17L24Q0WX57 530 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 PTK7Q13308 1070 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 ARSJQ5FYB0 599 aaPredicted RBP4.52□□□□□ -1.69
FOXN3-207ENST00000555010 WDR44Q5JSH3 913 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 TRIM22Q8IYM9 498 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 PGBD3Q8N328 593 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 ZDHHC1Q8WTX9 485 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 NANOS1Q8WY41 292 aaKnown RBP4.52□□□□□ -1.69
FOXN3-207ENST00000555010 L3MBTL2Q969R5 705 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 KLRG1Q96E93 195 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 CCDC97Q96F63 343 aaPredicted RBP4.52□□□□□ -1.69
FOXN3-207ENST00000555010 NUCKS1Q9H1E3 243 aaKnown RBP4.52□□□□□ -1.69
FOXN3-207ENST00000555010 NHSL1Q5SYE7 1610 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 ZFYVE9O95405 1425 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 NOS1P29475 1434 aa4.52□□□□□ -1.69
FOXN3-207ENST00000555010 DUOX2Q9NRD8 1548 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 AFF2P51816 1311 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 H7C1W4 665 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 WIPF1O43516 503 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 NOS2P35228 1153 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 EPHA4P54764 986 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 MEX3CQ5U5Q3 659 aaKnown RBP4.51□□□□□ -1.69
FOXN3-207ENST00000555010 BICDL1Q6ZP65 573 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 ANKMY2Q8IV38 441 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 SIX5Q8N196 739 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 CCDC82Q8N4S0 544 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 SCG3Q8WXD2 468 aaKnown RBP4.51□□□□□ -1.69
FOXN3-207ENST00000555010 NCOA3Q9Y6Q9 1424 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 ATAD2Q6PL18 1390 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 ADGRB3O60242 1522 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 LMTK2Q8IWU2 1503 aa4.51□□□□□ -1.69
FOXN3-207ENST00000555010 SETD5Q9C0A6 1442 aa4.5□□□□□ -1.69
FOXN3-207ENST00000555010 A0A1W2PNR3 127 aa4.5□□□□□ -1.69
FOXN3-207ENST00000555010 PPP1R12BO60237 982 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-207ENST00000555010 RBM6P78332 1123 aaKnown RBP4.5□□□□□ -1.69
FOXN3-207ENST00000555010 FOXK2Q01167 660 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms