RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PDE4BQ07343 736 aa7.84□□□□□ -1.16
SYNE2-216ENST00000555002 PICALMQ13492 652 aa7.84□□□□□ -1.16
SYNE2-216ENST00000555002 CIB2O75838 187 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 STAT6P42226 847 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 RRAGBQ5VZM2 374 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 HSPA1LP34931 641 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 TBC1D31Q96DN5 1066 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
SYNE2-216ENST00000555002 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 NOC2LQ9Y3T9 749 aaKnown RBP7.83□□□□□ -1.16
SYNE2-216ENST00000555002 ASIC1P78348 528 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 DIXDC1Q155Q3 683 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 ANKS4BQ8N8V4 417 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 NOD1Q9Y239 953 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 IRX5P78411 483 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-216ENST00000555002 MFSD6Q6ZSS7 791 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 MX1P20591 662 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 KCNK9Q9NPC2 374 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 RFC4P35249 363 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 DUSP27Q5VZP5 1158 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 NACA2Q9H009 215 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 CEP83Q9Y592 693 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 ZBTB24O43167 697 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-216ENST00000555002 ZNF213O14771 459 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 N4BP3O15049 544 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 SELENOOQ9BVL4 669 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 CCDC8Q9H0W5 538 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-216ENST00000555002 USP16Q9Y5T5 823 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 TSPY3P0CV98 308 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 TSPY8P0CW00 308 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 MIPOL1Q8TD10 442 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 CCDC77Q9BR77 488 aa7.83□□□□□ -1.16
SYNE2-216ENST00000555002 DACT3Q96B18 629 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 HDAC9Q9UKV0 1011 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 E7EVH7 732 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 PSMD6Q15008 389 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 THEMISQ8N1K5 641 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 SPAG5Q96R06 1193 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 SPOUT1Q5T280 376 aaKnown RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 THUMPD2Q9BTF0 503 aaKnown RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 WIZO95785 1651 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 KRT5P13647 590 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 PPP1R21Q6ZMI0 780 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 JARID2Q92833 1246 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 FCHSD2O94868 740 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 FAM160A1Q05DH4 1040 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 SNW1Q13573 536 aaKnown RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 BANK1Q8NDB2 785 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 KIAA1524Q8TCG1 905 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 LPXNO60711 386 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 LMOD1P29536 600 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 GSTO1P78417 241 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 ANO3Q9BYT9 981 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 ZNF408Q9H9D4 720 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 IQSEC3Q9UPP2 1182 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 GSDMBQ8TAX9 411 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 WDR66Q8TBY9 1149 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 B4DLN1 442 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 GOLIM4O00461 696 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 MRPL12P52815 198 aaKnown RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 SMARCC2Q8TAQ2 1214 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 ZBTB3Q9H5J0 574 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 SH2B1Q9NRF2 756 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
SYNE2-216ENST00000555002 BACH1O14867 736 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 TRIM7Q9C029 511 aa7.82□□□□□ -1.16
SYNE2-216ENST00000555002 DNAJC21Q5F1R6 531 aaKnown RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CCDC129Q6ZRS4 1044 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CCDC121Q6ZUS5 278 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 MRRFQ96E11 262 aaKnown RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 BEGAINQ9BUH8 593 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 AFG3L2Q9Y4W6 797 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 ANKRD30BQ9BXX2 1392 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 ATP2A1O14983 1001 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 METAP2P50579 478 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 PPP1R7Q15435 360 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CCDC170Q8IYT3 715 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CRNKL1Q9BZJ0 848 aaKnown RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 USP37Q86T82 979 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CEP120Q8N960 986 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CUX1P39880 1505 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CDC5LQ99459 802 aaKnown RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 MSANTD4Q8NCY6 345 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 KIF1BPQ96EK5 621 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 STMN4Q9H169 189 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 FAM184BQ9ULE4 1060 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 GNG11P61952 73 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 MVPQ14764 893 aaKnown RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 KIF3CO14782 793 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 GNL1P36915 607 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CFAP70Q5T0N1 1121 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 BRD4O60885 1362 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-216ENST00000555002 KRT9P35527 623 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 NAPAP54920 295 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 GTF3C6Q969F1 213 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 CALCOCO1Q9P1Z2 691 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms