RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 SCN4AP35499 1836 aa13.27□□□□□ -0.28
CCDC85C-203ENST00000554996 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 BEND3Q5T5X7 828 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 TNNQ9UQP3 1299 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 KDM2BQ8NHM5 1336 aa13.27□□□□□ -0.29
CCDC85C-203ENST00000554996 TOMM70O94826 608 aa13.26□□□□□ -0.29
CCDC85C-203ENST00000554996 HSPA6P17066 643 aa13.26□□□□□ -0.29
CCDC85C-203ENST00000554996 LINS1Q8NG48 757 aa13.26□□□□□ -0.29
CCDC85C-203ENST00000554996 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
CCDC85C-203ENST00000554996 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 DDNO94850 711 aaPredicted RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 CRAMP1Q96RY5 1269 aa13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 MYD88Q99836 296 aa13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
CCDC85C-203ENST00000554996 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 RLBP1P12271 317 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 HTRA3P83110 453 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 FAM89AQ96GI7 184 aa13.24□□□□□ -0.29
CCDC85C-203ENST00000554996 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 PLIN1O60240 522 aa13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 GCKRQ14397 625 aa13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
CCDC85C-203ENST00000554996 UTYO14607 1347 aa13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 SCN9AQ15858 1988 aa13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 CASP7P55210 303 aa13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 DZIP1LQ8IYY4 767 aaKnown RBP13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 RBM17Q96I25 401 aaKnown RBP13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 PSMD1Q99460 953 aa13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
CCDC85C-203ENST00000554996 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 RTKN2Q8IZC4 609 aa13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.29
CCDC85C-203ENST00000554996 H7C1W4 665 aa13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 FZD9O00144 591 aa13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 PCCAP05165 728 aaPredicted RBP13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 PSME4Q14997 1843 aa13.2□□□□□ -0.3
CCDC85C-203ENST00000554996 CDHR2Q9BYE9 1310 aa13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 GRM8O00222 908 aa13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 MS4A1P11836 297 aa13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 GRAPQ13588 217 aa13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 AOC3Q16853 763 aa13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 FTSJ3Q8IY81 847 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 GRAPLQ8TC17 118 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
CCDC85C-203ENST00000554996 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-203ENST00000554996 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
CCDC85C-203ENST00000554996 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
CCDC85C-203ENST00000554996 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-203ENST00000554996 NBPF7P0C2Y1 421 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 APLP1P51693 650 aa13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 FSTL1Q12841 308 aa13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 MVPQ14764 893 aaKnown RBP13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 DNAJC5GQ8N7S2 189 aa13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 SMC1BQ8NDV3 1235 aa13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 PLA2G12BQ9BX93 195 aa13.17□□□□□ -0.3
CCDC85C-203ENST00000554996 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms