RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 N4BP3O15049 544 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 CKAP4Q07065 602 aaKnown RBP16■□□□□ 0.15
VTI1B-204ENST00000554659 ISM2Q6H9L7 571 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 DNM1Q05193 864 aaKnown RBP15.99■□□□□ 0.15
VTI1B-204ENST00000554659 CCDC40Q4G0X9 1142 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
VTI1B-204ENST00000554659 LRRC27Q9C0I9 530 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 UQCRFS1P1P0C7P4 283 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 SPAG1Q07617 926 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 CCDC97Q96F63 343 aaPredicted RBP15.99■□□□□ 0.15
VTI1B-204ENST00000554659 ZMYND15Q9H091 742 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 ACEP12821 1306 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 TTC41PQ6P2S7 1318 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 CTNNBL1Q8WYA6 563 aaPredicted RBP15.99■□□□□ 0.15
VTI1B-204ENST00000554659 CEP63Q96MT8 703 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 STAMBPO95630 424 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
VTI1B-204ENST00000554659 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
VTI1B-204ENST00000554659 SNRPA1P09661 255 aaKnown RBP15.98■□□□□ 0.15
VTI1B-204ENST00000554659 MCMDC2Q4G0Z9 681 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
VTI1B-204ENST00000554659 ARFGAP3Q9NP61 516 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 KDM5BQ9UGL1 1544 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
VTI1B-204ENST00000554659 DNAJC25Q9H1X3 360 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 JADE2Q9NQC1 790 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 FANCAO15360 1455 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 PDE4BQ07343 736 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
VTI1B-204ENST00000554659 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 MNAT1P51948 309 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 TYRO3Q06418 890 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 CETN1Q12798 172 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 CCDC96Q2M329 555 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 CUL5Q93034 780 aa15.98■□□□□ 0.15
VTI1B-204ENST00000554659 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 RLBP1P12271 317 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ALG1Q9BT22 464 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 KRT23Q9C075 422 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 DNAI1Q9UI46 699 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 TTC21AQ8NDW8 1320 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 DUOX2Q9NRD8 1548 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 SLU7O95391 586 aaKnown RBP15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 TIGD1Q96MW7 591 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ZBTB43O43298 467 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 HOOK3Q86VS8 718 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 TMTC2Q8N394 836 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 AOPEPQ8N6M6 819 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 CHPF2Q9P2E5 772 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 CTAGE15A4D2H0 777 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
VTI1B-204ENST00000554659 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
VTI1B-204ENST00000554659 CTAGE8P0CG41 777 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 CEP85Q6P2H3 762 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 Q6ZUG5 572 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 CTAGE6Q86UF2 777 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
VTI1B-204ENST00000554659 CTAGE4Q8IX94 777 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
VTI1B-204ENST00000554659 TRIM47Q96LD4 638 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 KAT14Q9H8E8 782 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
VTI1B-204ENST00000554659 ZPR1O75312 459 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 IDEP14735 1019 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 TTC12Q9H892 705 aaPredicted RBP15.96■□□□□ 0.15
VTI1B-204ENST00000554659 NPHP3Q7Z494 1330 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 TMCO5BA8MYB1 307 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 CYLC1P35663 651 aaPredicted RBP15.96■□□□□ 0.15
VTI1B-204ENST00000554659 WTAPQ15007 396 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 IFI16Q16666 785 aaKnown RBP15.96■□□□□ 0.15
VTI1B-204ENST00000554659 RAB11FIP4Q86YS3 637 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 CNNM2Q9H8M5 875 aa15.96■□□□□ 0.15
VTI1B-204ENST00000554659 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.14
VTI1B-204ENST00000554659 NBPF7P0C2Y1 421 aaPredicted RBP15.95■□□□□ 0.14
VTI1B-204ENST00000554659 MAATS1Q7Z4T9 603 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 CDC5LQ99459 802 aaKnown RBP15.95■□□□□ 0.14
VTI1B-204ENST00000554659 EHMT1Q9H9B1 1298 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 FOXO3O43524 673 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 VAMP4O75379 141 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
VTI1B-204ENST00000554659 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 GRM8O00222 908 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 PPFIA3O75145 1194 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 TRIM21P19474 475 aaKnown RBP15.95■□□□□ 0.14
VTI1B-204ENST00000554659 SYT1P21579 422 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 RRAGBQ5VZM2 374 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 SPECC1LQ69YQ0 1117 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 RTL1A6NKG5 1358 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 AKR1B10O60218 316 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms