RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 USP17L12C9JPN9 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L21D6R901 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 ELNP15502 786 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 IGFBP4P22692 258 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 MBTPS1Q14703 1052 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 ANKMY2Q8IV38 441 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 CALR3Q96L12 384 aaKnown RBP7.15□□□□□ -1.26
ATXN3-227ENST00000554491 RSF1Q96T23 1441 aaPredicted RBP7.15□□□□□ -1.27
ATXN3-227ENST00000554491 PRDM2Q13029 1718 aa7.15□□□□□ -1.27
ATXN3-227ENST00000554491 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-227ENST00000554491 INPP5BP32019 993 aa7.14□□□□□ -1.27
ATXN3-227ENST00000554491 ADGRE1Q14246 886 aa7.14□□□□□ -1.27
ATXN3-227ENST00000554491 DMRTC2Q8IXT2 367 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-227ENST00000554491 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
ATXN3-227ENST00000554491 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 C9orf172C9J069 976 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 IDH3AP50213 366 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 RAC1P63000 192 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 DGKZQ13574 1117 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 ILDR2Q71H61 639 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 KRT25Q7Z3Z0 450 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 FAM35AQ86V20 835 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 ARXQ96QS3 562 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 QTRT2Q9H974 415 aaKnown RBP7.13□□□□□ -1.27
ATXN3-227ENST00000554491 EFCC1Q9HA90 598 aa7.13□□□□□ -1.27
ATXN3-227ENST00000554491 ZNF608Q9ULD9 1512 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-227ENST00000554491 ZBTB42B2RXF5 422 aa7.12□□□□□ -1.27
ATXN3-227ENST00000554491 RGS9O75916 674 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-227ENST00000554491 CPB1P15086 417 aa7.12□□□□□ -1.27
ATXN3-227ENST00000554491 TARSP26639 723 aaKnown RBP7.12□□□□□ -1.27
ATXN3-227ENST00000554491 PLAURQ03405 335 aa7.12□□□□□ -1.27
ATXN3-227ENST00000554491 PRSS36Q5K4E3 855 aa7.12□□□□□ -1.27
ATXN3-227ENST00000554491 LENG1Q96BZ8 264 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-227ENST00000554491 VRTNQ9H8Y1 702 aa7.12□□□□□ -1.27
ATXN3-227ENST00000554491 MROH2BQ7Z745 1585 aa7.12□□□□□ -1.27
ATXN3-227ENST00000554491 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
ATXN3-227ENST00000554491 WEE1P30291 646 aa7.11□□□□□ -1.27
ATXN3-227ENST00000554491 MLLT1Q03111 559 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-227ENST00000554491 TXNRD3Q86VQ6 643 aa7.11□□□□□ -1.27
ATXN3-227ENST00000554491 FMR1NBQ8N0W7 255 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-227ENST00000554491 IFT140Q96RY7 1462 aa7.11□□□□□ -1.27
ATXN3-227ENST00000554491 SASH3O75995 380 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 MAP3K6O95382 1288 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 GRIK5Q16478 980 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 PERM1Q5SV97 790 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 DHX32Q7L7V1 743 aaKnown RBP7.1□□□□□ -1.27
ATXN3-227ENST00000554491 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 LPIN3Q9BQK8 851 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 USP20Q9Y2K6 914 aa7.1□□□□□ -1.27
ATXN3-227ENST00000554491 A6NJR5 290 aa7.09□□□□□ -1.27
ATXN3-227ENST00000554491 MICAL2O94851 1124 aa7.09□□□□□ -1.27
ATXN3-227ENST00000554491 EPB42P16452 691 aa7.09□□□□□ -1.27
ATXN3-227ENST00000554491 ARSDP51689 593 aa7.09□□□□□ -1.27
ATXN3-227ENST00000554491 USP21Q9UK80 565 aa7.09□□□□□ -1.27
ATXN3-227ENST00000554491 OPLAHO14841 1288 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-227ENST00000554491 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 CFAP70Q5T0N1 1121 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 MSL1Q68DK7 614 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 TRPM4Q8TD43 1214 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 LRFN2Q9ULH4 789 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 CFTRP13569 1480 aa7.08□□□□□ -1.28
ATXN3-227ENST00000554491 CLASP1Q7Z460 1538 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 FOXO3O43524 673 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 H2AFB1P0C5Y9 115 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 H2AFB2P0C5Z0 115 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 RARAP10276 462 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 TMEM132AQ24JP5 1023 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 TP53INP1Q96A56 240 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 MYO19Q96H55 970 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 PSMG3-AS1Q96PY0 264 aa7.07□□□□□ -1.28
ATXN3-227ENST00000554491 SSBP4Q9BWG4 385 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-227ENST00000554491 GPLD1P80108 840 aa7.06□□□□□ -1.28
ATXN3-227ENST00000554491 PCSK7Q16549 785 aa7.06□□□□□ -1.28
ATXN3-227ENST00000554491 ARTNQ5T4W7 220 aa7.06□□□□□ -1.28
ATXN3-227ENST00000554491 ELMSAN1Q6PJG2 1045 aa7.06□□□□□ -1.28
ATXN3-227ENST00000554491 VTI1AQ96AJ9 217 aa7.06□□□□□ -1.28
ATXN3-227ENST00000554491 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
ATXN3-227ENST00000554491 RTCBQ9Y3I0 505 aaKnown RBP7.06□□□□□ -1.28
ATXN3-227ENST00000554491 DEAF1O75398 565 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-227ENST00000554491 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
ATXN3-227ENST00000554491 WFDC8Q8IUA0 241 aa7.05□□□□□ -1.28
ATXN3-227ENST00000554491 FAM200AQ8TCP9 573 aa7.05□□□□□ -1.28
ATXN3-227ENST00000554491 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
ATXN3-227ENST00000554491 ZFP64Q9NPA5 681 aa7.05□□□□□ -1.28
ATXN3-227ENST00000554491 WIZO95785 1651 aa7.05□□□□□ -1.28
ATXN3-227ENST00000554491 KIF13AQ9H1H9 1805 aa7.04□□□□□ -1.28
ATXN3-227ENST00000554491 IREB2P48200 963 aaKnown RBP7.04□□□□□ -1.28
ATXN3-227ENST00000554491 FKBP5Q13451 457 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-227ENST00000554491 RGL4Q8IZJ4 473 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms