RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 FAM212AQ96EL1 285 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
LINC00640-201ENST00000554409 ZNF521Q96K83 1311 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 WDR90Q96KV7 1748 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 STK31Q9BXU1 1019 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 KDM2BQ8NHM5 1336 aa9.68□□□□□ -0.86
LINC00640-201ENST00000554409 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00640-201ENST00000554409 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
LINC00640-201ENST00000554409 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
LINC00640-201ENST00000554409 RTKN2Q8IZC4 609 aa9.68□□□□□ -0.86
LINC00640-201ENST00000554409 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
LINC00640-201ENST00000554409 SALL2Q9Y467 1007 aaPredicted RBP9.68□□□□□ -0.86
LINC00640-201ENST00000554409 MYH3P11055 1940 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 GLTPD2A6NH11 291 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
LINC00640-201ENST00000554409 VAMP4O75379 141 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
LINC00640-201ENST00000554409 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 SYNE4Q8N205 404 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 PSMD1Q99460 953 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 METTL22Q9BUU2 404 aaPredicted RBP9.67□□□□□ -0.86
LINC00640-201ENST00000554409 MYH16Q9H6N6 1097 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 TAF1P21675 1872 aa9.67□□□□□ -0.86
LINC00640-201ENST00000554409 ABCC4O15439 1325 aa9.66□□□□□ -0.86
LINC00640-201ENST00000554409 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
LINC00640-201ENST00000554409 SF3B3Q15393 1217 aaKnown RBP9.66□□□□□ -0.86
LINC00640-201ENST00000554409 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
LINC00640-201ENST00000554409 OLFM4Q6UX06 510 aa9.66□□□□□ -0.86
LINC00640-201ENST00000554409 ZBTB38Q8NAP3 1195 aaPredicted RBP9.66□□□□□ -0.86
LINC00640-201ENST00000554409 MYD88Q99836 296 aa9.66□□□□□ -0.86
LINC00640-201ENST00000554409 NMRK2Q9NPI5 230 aa9.66□□□□□ -0.86
LINC00640-201ENST00000554409 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
LINC00640-201ENST00000554409 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
LINC00640-201ENST00000554409 BBOX1O75936 387 aa9.65□□□□□ -0.86
LINC00640-201ENST00000554409 PCCAP05165 728 aaPredicted RBP9.65□□□□□ -0.86
LINC00640-201ENST00000554409 HSP90B1P14625 803 aaKnown RBP9.65□□□□□ -0.86
LINC00640-201ENST00000554409 DDX46Q7L014 1031 aaKnown RBP9.65□□□□□ -0.86
LINC00640-201ENST00000554409 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
LINC00640-201ENST00000554409 FAM89AQ96GI7 184 aa9.65□□□□□ -0.86
LINC00640-201ENST00000554409 CWC25Q9NXE8 425 aaPredicted RBP9.65□□□□□ -0.86
LINC00640-201ENST00000554409 ATP6V0A2Q9Y487 856 aa9.65□□□□□ -0.86
LINC00640-201ENST00000554409 SCN4AP35499 1836 aa9.65□□□□□ -0.86
LINC00640-201ENST00000554409 LTBP1Q14766 1721 aa9.65□□□□□ -0.87
LINC00640-201ENST00000554409 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
LINC00640-201ENST00000554409 TOMM70O94826 608 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 IARSP41252 1262 aaKnown RBP9.64□□□□□ -0.87
LINC00640-201ENST00000554409 FLIIQ13045 1269 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 GRAPQ13588 217 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 GSE1Q14687 1217 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 DPY19L2Q6NUT2 758 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 G2E3Q7L622 706 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 TMC4Q7Z404 712 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 GRAPLQ8TC17 118 aaPredicted RBP9.64□□□□□ -0.87
LINC00640-201ENST00000554409 COL4A1P02462 1669 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 COL4A5P29400 1685 aa9.64□□□□□ -0.87
LINC00640-201ENST00000554409 DUOX1Q9NRD9 1551 aa9.63□□□□□ -0.87
LINC00640-201ENST00000554409 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
LINC00640-201ENST00000554409 IGKV5-2P06315 115 aa9.63□□□□□ -0.87
LINC00640-201ENST00000554409 NEXNQ0ZGT2 675 aa9.63□□□□□ -0.87
LINC00640-201ENST00000554409 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
LINC00640-201ENST00000554409 RBM46Q8TBY0 533 aaKnown RBP9.63□□□□□ -0.87
LINC00640-201ENST00000554409 TMX4Q9H1E5 349 aaPredicted RBP9.63□□□□□ -0.87
LINC00640-201ENST00000554409 VPS33BQ9H267 617 aa9.63□□□□□ -0.87
LINC00640-201ENST00000554409 RRAGCQ9HB90 399 aa9.63□□□□□ -0.87
LINC00640-201ENST00000554409 ZNF277Q9NRM2 450 aaPredicted RBP9.63□□□□□ -0.87
LINC00640-201ENST00000554409 NEURL1BA8MQ27 555 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 POTECB2RU33 542 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 E9PSI1 815 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 FZD9O00144 591 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 PDE8AO60658 829 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 GABBR2O75899 941 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
LINC00640-201ENST00000554409 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
LINC00640-201ENST00000554409 SUPT20HQ8NEM7 779 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 DNAAF4Q8WXU2 420 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 ZNF428Q96B54 188 aa9.62□□□□□ -0.87
LINC00640-201ENST00000554409 L3MBTL3Q96JM7 780 aaPredicted RBP9.62□□□□□ -0.87
LINC00640-201ENST00000554409 RTFDC1Q9BY42 306 aaPredicted RBP9.62□□□□□ -0.87
LINC00640-201ENST00000554409 SLFN5Q08AF3 891 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 FSTL1Q12841 308 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
LINC00640-201ENST00000554409 CCDC152Q4G0S7 254 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
LINC00640-201ENST00000554409 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 C16orf71Q8IYS4 520 aaPredicted RBP9.61□□□□□ -0.87
LINC00640-201ENST00000554409 LINS1Q8NG48 757 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 JDP2Q8WYK2 163 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 RTL9Q8NET4 1388 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 SPEF2Q9C093 1822 aa9.61□□□□□ -0.87
LINC00640-201ENST00000554409 ADAMTSL1Q8N6G6 1762 aa9.6□□□□□ -0.87
LINC00640-201ENST00000554409 ZNF541Q9H0D2 1346 aa9.6□□□□□ -0.87
LINC00640-201ENST00000554409 H7C1W4 665 aa9.6□□□□□ -0.87
LINC00640-201ENST00000554409 DDNO94850 711 aaPredicted RBP9.6□□□□□ -0.87
LINC00640-201ENST00000554409 HSPA6P17066 643 aa9.6□□□□□ -0.87
LINC00640-201ENST00000554409 GCKRQ14397 625 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms