RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.81
ITGA7-208ENST00000554327 RFC4P35249 363 aa20.14■□□□□ 0.81
ITGA7-208ENST00000554327 BICDL1Q6ZP65 573 aa20.14■□□□□ 0.81
ITGA7-208ENST00000554327 NUTM1Q86Y26 1132 aa20.14■□□□□ 0.81
ITGA7-208ENST00000554327 CDHR2Q9BYE9 1310 aa20.13■□□□□ 0.81
ITGA7-208ENST00000554327 RFX5P48382 616 aaPredicted RBP20.13■□□□□ 0.81
ITGA7-208ENST00000554327 CHMP3Q9Y3E7 222 aa20.13■□□□□ 0.81
ITGA7-208ENST00000554327 ERC1Q8IUD2 1116 aa20.12■□□□□ 0.81
ITGA7-208ENST00000554327 IRS4O14654 1257 aaPredicted RBP20.12■□□□□ 0.81
ITGA7-208ENST00000554327 NTSR2O95665 410 aa20.12■□□□□ 0.81
ITGA7-208ENST00000554327 EN1Q05925 392 aaPredicted RBP20.12■□□□□ 0.81
ITGA7-208ENST00000554327 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
ITGA7-208ENST00000554327 CCDC85AQ96PX6 553 aaPredicted RBP20.12■□□□□ 0.81
ITGA7-208ENST00000554327 UTP14AQ9BVJ6 771 aaKnown RBP20.12■□□□□ 0.81
ITGA7-208ENST00000554327 PLA2G12BQ9BX93 195 aa20.12■□□□□ 0.81
ITGA7-208ENST00000554327 TBC1D2Q9BYX2 928 aa20.12■□□□□ 0.81
ITGA7-208ENST00000554327 SIL1Q9H173 461 aa20.12■□□□□ 0.81
ITGA7-208ENST00000554327 EZH2Q15910 746 aaKnown RBP20.11■□□□□ 0.81
ITGA7-208ENST00000554327 ADRA2BP18089 450 aa20.1■□□□□ 0.81
ITGA7-208ENST00000554327 PTPN12Q05209 780 aaKnown RBP20.1■□□□□ 0.81
ITGA7-208ENST00000554327 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
ITGA7-208ENST00000554327 RGL2O15211 777 aa20.1■□□□□ 0.81
ITGA7-208ENST00000554327 SSFA2P28290 1259 aa20.1■□□□□ 0.81
ITGA7-208ENST00000554327 SH3TC1Q8TE82 1336 aa20.1■□□□□ 0.81
ITGA7-208ENST00000554327 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
ITGA7-208ENST00000554327 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
ITGA7-208ENST00000554327 CLASRPQ8N2M8 674 aaKnown RBP20.09■□□□□ 0.81
ITGA7-208ENST00000554327 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
ITGA7-208ENST00000554327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.09■□□□□ 0.81
ITGA7-208ENST00000554327 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
ITGA7-208ENST00000554327 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.81
ITGA7-208ENST00000554327 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
ITGA7-208ENST00000554327 TAF1P21675 1872 aa20.08■□□□□ 0.8
ITGA7-208ENST00000554327 CSF1RP07333 972 aa20.08■□□□□ 0.8
ITGA7-208ENST00000554327 RILPL2Q969X0 211 aa20.08■□□□□ 0.8
ITGA7-208ENST00000554327 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.8
ITGA7-208ENST00000554327 COPRSQ9NQ92 184 aa20.08■□□□□ 0.8
ITGA7-208ENST00000554327 CTSWP56202 376 aa20.07■□□□□ 0.8
ITGA7-208ENST00000554327 TTLL11Q8NHH1 800 aa20.07■□□□□ 0.8
ITGA7-208ENST00000554327 PI4K2BQ8TCG2 481 aa20.07■□□□□ 0.8
ITGA7-208ENST00000554327 KIF2CQ99661 725 aa20.07■□□□□ 0.8
ITGA7-208ENST00000554327 ERC2O15083 957 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 PDE8AO60658 829 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 SASH1O94885 1247 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 USP26Q9BXU7 913 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 GYS1P13807 737 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 ERFEQ4G0M1 354 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 DEFB132Q7Z7B7 95 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 GREM2Q9H772 168 aa20.06■□□□□ 0.8
ITGA7-208ENST00000554327 TTC41PQ6P2S7 1318 aa20.05■□□□□ 0.8
ITGA7-208ENST00000554327 REC8O95072 547 aa20.05■□□□□ 0.8
ITGA7-208ENST00000554327 NBR1Q14596 966 aa20.05■□□□□ 0.8
ITGA7-208ENST00000554327 NFIXQ14938 502 aa20.04■□□□□ 0.8
ITGA7-208ENST00000554327 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
ITGA7-208ENST00000554327 ABCC12Q96J65 1359 aa20.04■□□□□ 0.8
ITGA7-208ENST00000554327 COL4A1P02462 1669 aa20.04■□□□□ 0.8
ITGA7-208ENST00000554327 TNRC6CQ9HCJ0 1690 aaKnown RBP20.04■□□□□ 0.8
ITGA7-208ENST00000554327 IFIT2P09913 472 aaKnown RBP20.04■□□□□ 0.8
ITGA7-208ENST00000554327 CHMLP26374 656 aa20.04■□□□□ 0.8
ITGA7-208ENST00000554327 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
ITGA7-208ENST00000554327 CCDC57Q2TAC2 916 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 CCDC24Q8N4L8 307 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 SNX21Q969T3 373 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 AK9Q5TCS8 1911 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 QSER1Q2KHR3 1735 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 ITGA6P23229 1130 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 HMGB2P26583 209 aaKnown RBP20.03■□□□□ 0.8
ITGA7-208ENST00000554327 AACSQ86V21 672 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 NBPF5PQ86XG9 351 aaPredicted RBP20.03■□□□□ 0.8
ITGA7-208ENST00000554327 HSCBQ8IWL3 235 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 GPATCH3Q96I76 525 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 ESYT1Q9BSJ8 1104 aa20.03■□□□□ 0.8
ITGA7-208ENST00000554327 GLRX3O76003 335 aaKnown RBP20.02■□□□□ 0.8
ITGA7-208ENST00000554327 IFIT5Q13325 482 aaKnown RBP20.02■□□□□ 0.8
ITGA7-208ENST00000554327 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
ITGA7-208ENST00000554327 LRRC24Q50LG9 513 aa20.02■□□□□ 0.8
ITGA7-208ENST00000554327 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
ITGA7-208ENST00000554327 ATG9AQ7Z3C6 839 aa20.02■□□□□ 0.8
ITGA7-208ENST00000554327 PUS3Q9BZE2 481 aaKnown RBP20.02■□□□□ 0.8
ITGA7-208ENST00000554327 ECHDC1Q9NTX5 307 aa20.02■□□□□ 0.8
ITGA7-208ENST00000554327 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
ITGA7-208ENST00000554327 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.79
ITGA7-208ENST00000554327 MAP4K4O95819 1239 aaPredicted RBP20.01■□□□□ 0.79
ITGA7-208ENST00000554327 BAG6P46379 1132 aa20.01■□□□□ 0.79
ITGA7-208ENST00000554327 EAF2Q96CJ1 260 aaPredicted RBP20.01■□□□□ 0.79
ITGA7-208ENST00000554327 LRP5O75197 1615 aa20■□□□□ 0.79
ITGA7-208ENST00000554327 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
ITGA7-208ENST00000554327 TFCP2Q12800 502 aa20■□□□□ 0.79
ITGA7-208ENST00000554327 CNTROBQ8N137 903 aa20■□□□□ 0.79
ITGA7-208ENST00000554327 NYXQ9GZU5 481 aa20■□□□□ 0.79
ITGA7-208ENST00000554327 EYA2O00167 538 aa19.99■□□□□ 0.79
ITGA7-208ENST00000554327 SLKQ9H2G2 1235 aaPredicted RBP19.99■□□□□ 0.79
ITGA7-208ENST00000554327 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
ITGA7-208ENST00000554327 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
ITGA7-208ENST00000554327 TAF7LQ5H9L4 462 aa19.98■□□□□ 0.79
ITGA7-208ENST00000554327 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
ITGA7-208ENST00000554327 TM4SF1P30408 202 aa19.97■□□□□ 0.79
ITGA7-208ENST00000554327 SLC15A2Q16348 729 aa19.97■□□□□ 0.79
ITGA7-208ENST00000554327 CCDC8Q9H0W5 538 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms