RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 UBTFL1P0CB47 393 aaPredicted RBP23.19■■□□□ 1.3
PSEN1-210ENST00000554131 RABL6Q3YEC7 729 aaPredicted RBP23.19■■□□□ 1.3
PSEN1-210ENST00000554131 KLHL34Q8N239 644 aa23.19■■□□□ 1.3
PSEN1-210ENST00000554131 TTLL11Q8NHH1 800 aa23.19■■□□□ 1.3
PSEN1-210ENST00000554131 PDZRN3Q9UPQ7 1066 aa23.19■■□□□ 1.3
PSEN1-210ENST00000554131 GNAI3P08754 354 aa23.18■■□□□ 1.3
PSEN1-210ENST00000554131 HSP90B1P14625 803 aaKnown RBP23.18■■□□□ 1.3
PSEN1-210ENST00000554131 HOXA10P31260 410 aaPredicted RBP23.18■■□□□ 1.3
PSEN1-210ENST00000554131 BICC1Q9H694 974 aaKnown RBP23.18■■□□□ 1.3
PSEN1-210ENST00000554131 DDX19BQ9UMR2 479 aa23.18■■□□□ 1.3
PSEN1-210ENST00000554131 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
PSEN1-210ENST00000554131 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
PSEN1-210ENST00000554131 CACNA1SQ13698 1873 aa23.17■■□□□ 1.3
PSEN1-210ENST00000554131 H0YIN7 160 aa23.16■■□□□ 1.3
PSEN1-210ENST00000554131 NPR1P16066 1061 aa23.16■■□□□ 1.3
PSEN1-210ENST00000554131 STYK1Q6J9G0 422 aa23.16■■□□□ 1.3
PSEN1-210ENST00000554131 MASTLQ96GX5 879 aa23.16■■□□□ 1.3
PSEN1-210ENST00000554131 ZBTB40Q9NUA8 1239 aa23.16■■□□□ 1.3
PSEN1-210ENST00000554131 CRBNQ96SW2 442 aa23.15■■□□□ 1.3
PSEN1-210ENST00000554131 GREM2Q9H772 168 aa23.15■■□□□ 1.3
PSEN1-210ENST00000554131 SLX4Q8IY92 1834 aa23.15■■□□□ 1.3
PSEN1-210ENST00000554131 LMBR1LQ6UX01 489 aa23.14■■□□□ 1.29
PSEN1-210ENST00000554131 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
PSEN1-210ENST00000554131 GNAI2P04899 355 aa23.13■■□□□ 1.29
PSEN1-210ENST00000554131 FAM161AQ3B820 660 aa23.13■■□□□ 1.29
PSEN1-210ENST00000554131 CCDC152Q4G0S7 254 aa23.13■■□□□ 1.29
PSEN1-210ENST00000554131 CCDC85AQ96PX6 553 aaPredicted RBP23.13■■□□□ 1.29
PSEN1-210ENST00000554131 CRAMP1Q96RY5 1269 aa23.13■■□□□ 1.29
PSEN1-210ENST00000554131 RPGRQ92834 1020 aaKnown RBP23.12■■□□□ 1.29
PSEN1-210ENST00000554131 C1orf115Q9H7X2 142 aa23.12■■□□□ 1.29
PSEN1-210ENST00000554131 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
PSEN1-210ENST00000554131 SPEF2Q9C093 1822 aa23.11■■□□□ 1.29
PSEN1-210ENST00000554131 ARFGEF1Q9Y6D6 1849 aa23.11■■□□□ 1.29
PSEN1-210ENST00000554131 MTX1Q13505 466 aa23.11■■□□□ 1.29
PSEN1-210ENST00000554131 RBM17Q96I25 401 aaKnown RBP23.11■■□□□ 1.29
PSEN1-210ENST00000554131 GOLGB1Q14789 3259 aaKnown RBP23.1■■□□□ 1.29
PSEN1-210ENST00000554131 SLC51AQ86UW1 340 aa23.1■■□□□ 1.29
PSEN1-210ENST00000554131 CELF1Q92879 486 aaKnown RBP23.1■■□□□ 1.29
PSEN1-210ENST00000554131 ZNF622Q969S3 477 aaKnown RBP eCLIP23.1■■□□□ 1.29
PSEN1-210ENST00000554131 PIM2Q9P1W9 311 aa23.1■■□□□ 1.29
PSEN1-210ENST00000554131 HDAC5Q9UQL6 1122 aa23.1■■□□□ 1.29
PSEN1-210ENST00000554131 ITGA6P23229 1130 aa23.09■■□□□ 1.29
PSEN1-210ENST00000554131 RFX5P48382 616 aaPredicted RBP23.09■■□□□ 1.29
PSEN1-210ENST00000554131 GRAPQ13588 217 aa23.09■■□□□ 1.29
PSEN1-210ENST00000554131 DDX46Q7L014 1031 aaKnown RBP23.09■■□□□ 1.29
PSEN1-210ENST00000554131 GRAPLQ8TC17 118 aaPredicted RBP23.09■■□□□ 1.29
PSEN1-210ENST00000554131 ALDH1B1P30837 517 aa23.08■■□□□ 1.29
PSEN1-210ENST00000554131 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
PSEN1-210ENST00000554131 TTLL6Q8N841 843 aa23.08■■□□□ 1.29
PSEN1-210ENST00000554131 C7orf43Q8WVR3 580 aa23.08■■□□□ 1.29
PSEN1-210ENST00000554131 CNKSR1Q969H4 720 aa23.08■■□□□ 1.29
PSEN1-210ENST00000554131 SNED1Q8TER0 1413 aa23.08■■□□□ 1.28
PSEN1-210ENST00000554131 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-210ENST00000554131 EXOC6Q8TAG9 804 aa23.07■■□□□ 1.28
PSEN1-210ENST00000554131 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
PSEN1-210ENST00000554131 PNMA6EA0A0J9YXQ4 647 aa23.06■■□□□ 1.28
PSEN1-210ENST00000554131 CEP85Q6P2H3 762 aa23.06■■□□□ 1.28
PSEN1-210ENST00000554131 WWC3Q9ULE0 1092 aa23.06■■□□□ 1.28
PSEN1-210ENST00000554131 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
PSEN1-210ENST00000554131 LTBP1Q14766 1721 aa23.05■■□□□ 1.28
PSEN1-210ENST00000554131 RPS8P62241 208 aaKnown RBP23.05■■□□□ 1.28
PSEN1-210ENST00000554131 IFIT5Q13325 482 aaKnown RBP23.05■■□□□ 1.28
PSEN1-210ENST00000554131 DALRD3Q5D0E6 543 aaKnown RBP23.05■■□□□ 1.28
PSEN1-210ENST00000554131 CHMP3Q9Y3E7 222 aa23.05■■□□□ 1.28
PSEN1-210ENST00000554131 ANKRD18BA2A2Z9 1011 aa23.04■■□□□ 1.28
PSEN1-210ENST00000554131 BBOX1O75936 387 aa23.04■■□□□ 1.28
PSEN1-210ENST00000554131 ATP8B2P98198 1209 aa23.04■■□□□ 1.28
PSEN1-210ENST00000554131 POLA2Q14181 598 aa23.04■■□□□ 1.28
PSEN1-210ENST00000554131 SIRT2Q8IXJ6 389 aa23.04■■□□□ 1.28
PSEN1-210ENST00000554131 ZNF594Q96JF6 807 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-210ENST00000554131 CDC5LQ99459 802 aaKnown RBP23.04■■□□□ 1.28
PSEN1-210ENST00000554131 PPEF1O14829 653 aaPredicted RBP23.03■■□□□ 1.28
PSEN1-210ENST00000554131 YBX3P16989 372 aaKnown RBP eCLIP23.03■■□□□ 1.28
PSEN1-210ENST00000554131 PTPN12Q05209 780 aaKnown RBP23.03■■□□□ 1.28
PSEN1-210ENST00000554131 CCDC57Q2TAC2 916 aa23.03■■□□□ 1.28
PSEN1-210ENST00000554131 SSH3Q8TE77 659 aa23.03■■□□□ 1.28
PSEN1-210ENST00000554131 SRGAP3O43295 1099 aa23.02■■□□□ 1.28
PSEN1-210ENST00000554131 OLFM4Q6UX06 510 aa23.02■■□□□ 1.28
PSEN1-210ENST00000554131 ANKRD18AQ8IVF6 992 aa23.02■■□□□ 1.28
PSEN1-210ENST00000554131 KLHDC4Q8TBB5 520 aa23.02■■□□□ 1.28
PSEN1-210ENST00000554131 ATP6V0A2Q9Y487 856 aa23.02■■□□□ 1.28
PSEN1-210ENST00000554131 FER1L6Q2WGJ9 1857 aa23.01■■□□□ 1.27
PSEN1-210ENST00000554131 BSDC1Q9NW68 430 aaPredicted RBP23.01■■□□□ 1.27
PSEN1-210ENST00000554131 BCS1LQ9Y276 419 aa23.01■■□□□ 1.27
PSEN1-210ENST00000554131 PCDHB15Q9Y5E8 787 aa23.01■■□□□ 1.27
PSEN1-210ENST00000554131 TMC4Q7Z404 712 aa23■■□□□ 1.27
PSEN1-210ENST00000554131 RPAP2Q8IXW5 612 aaPredicted RBP23■■□□□ 1.27
PSEN1-210ENST00000554131 SP8Q8IXZ3 490 aa23■■□□□ 1.27
PSEN1-210ENST00000554131 COPRSQ9NQ92 184 aa23■■□□□ 1.27
PSEN1-210ENST00000554131 DUOX1Q9NRD9 1551 aa23■■□□□ 1.27
PSEN1-210ENST00000554131 C21orf2O43822 256 aa22.99■■□□□ 1.27
PSEN1-210ENST00000554131 AAMPQ13685 434 aa22.99■■□□□ 1.27
PSEN1-210ENST00000554131 PUS3Q9BZE2 481 aaKnown RBP22.99■■□□□ 1.27
PSEN1-210ENST00000554131 PA2G4Q9UQ80 394 aaKnown RBP22.99■■□□□ 1.27
PSEN1-210ENST00000554131 IGHMBP2P38935 993 aaKnown RBP22.98■■□□□ 1.27
PSEN1-210ENST00000554131 LRRC24Q50LG9 513 aa22.97■■□□□ 1.27
PSEN1-210ENST00000554131 ATG9AQ7Z3C6 839 aa22.97■■□□□ 1.27
PSEN1-210ENST00000554131 ZNF219Q9P2Y4 722 aaPredicted RBP22.97■■□□□ 1.27
PSEN1-210ENST00000554131 MINPP1Q9UNW1 487 aa22.97■■□□□ 1.27
PSEN1-210ENST00000554131 RIPOR2Q9Y4F9 1068 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms