RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 FSTL1Q12841 308 aa9.81□□□□□ -0.84
ATXN3-224ENST00000554040 RSBN1LQ6PCB5 846 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-224ENST00000554040 LTV1Q96GA3 475 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-224ENST00000554040 EVA1BQ9NVM1 165 aa9.81□□□□□ -0.84
ATXN3-224ENST00000554040 GJA5P36382 358 aa9.8□□□□□ -0.84
ATXN3-224ENST00000554040 SH3BP2P78314 561 aa9.8□□□□□ -0.84
ATXN3-224ENST00000554040 MTMR2Q13614 643 aa9.8□□□□□ -0.84
ATXN3-224ENST00000554040 C16orf71Q8IYS4 520 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-224ENST00000554040 ATP13A2Q9NQ11 1180 aa9.8□□□□□ -0.84
ATXN3-224ENST00000554040 PCDHB15Q9Y5E8 787 aa9.8□□□□□ -0.84
ATXN3-224ENST00000554040 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
ATXN3-224ENST00000554040 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
ATXN3-224ENST00000554040 TREML4Q6UXN2 200 aa9.79□□□□□ -0.84
ATXN3-224ENST00000554040 AMIGO3Q86WK7 504 aa9.79□□□□□ -0.84
ATXN3-224ENST00000554040 AK7Q96M32 723 aa9.79□□□□□ -0.84
ATXN3-224ENST00000554040 KIAA1210Q9ULL0 1709 aa9.79□□□□□ -0.84
ATXN3-224ENST00000554040 QRICH2Q9H0J4 1663 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 SPTLC1O15269 473 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 TGFB2P61812 414 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 UNC93B1Q9H1C4 597 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 BCS1LQ9Y276 419 aa9.78□□□□□ -0.84
ATXN3-224ENST00000554040 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
ATXN3-224ENST00000554040 ALDH1A1P00352 501 aa9.77□□□□□ -0.85
ATXN3-224ENST00000554040 SSFA2P28290 1259 aa9.77□□□□□ -0.85
ATXN3-224ENST00000554040 KCNH2Q12809 1159 aa9.77□□□□□ -0.85
ATXN3-224ENST00000554040 CGNL1Q0VF96 1302 aa9.77□□□□□ -0.85
ATXN3-224ENST00000554040 PALLDQ8WX93 1383 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 LY75O60449 1722 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 A0A0G2JLW4 131 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 CFAP99D6REC4 459 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 SNRPBP14678 240 aaKnown RBP9.76□□□□□ -0.85
ATXN3-224ENST00000554040 HOXC9P31274 260 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 MPRIPQ6WCQ1 1025 aa9.76□□□□□ -0.85
ATXN3-224ENST00000554040 HDGFL2Q7Z4V5 671 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-224ENST00000554040 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-224ENST00000554040 HSPA1AP0DMV8 641 aaKnown RBP9.75□□□□□ -0.85
ATXN3-224ENST00000554040 HSPA1BP0DMV9 641 aaKnown RBP9.75□□□□□ -0.85
ATXN3-224ENST00000554040 AMPHP49418 695 aa9.75□□□□□ -0.85
ATXN3-224ENST00000554040 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
ATXN3-224ENST00000554040 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
ATXN3-224ENST00000554040 BAP1Q92560 729 aa9.75□□□□□ -0.85
ATXN3-224ENST00000554040 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
ATXN3-224ENST00000554040 MMP10P09238 476 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 MAP3K19Q56UN5 1328 aa9.74□□□□□ -0.85
ATXN3-224ENST00000554040 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 MEGF6O75095 1541 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 DPEP1P16444 411 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 TATP17735 454 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-224ENST00000554040 FBLN1P23142 703 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 PDE4DQ08499 809 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
ATXN3-224ENST00000554040 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 SMC1BQ8NDV3 1235 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 RAPGEF4Q8WZA2 1011 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 PIGBQ92521 554 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 CICQ96RK0 1608 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-224ENST00000554040 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
ATXN3-224ENST00000554040 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 SIK1P57059 783 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 USHBP1Q8N6Y0 703 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 LINC00116Q8NCU8 138 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 L3MBTL2Q969R5 705 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
ATXN3-224ENST00000554040 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
ATXN3-224ENST00000554040 WDR90Q96KV7 1748 aa9.71□□□□□ -0.85
ATXN3-224ENST00000554040 CYP27B1O15528 508 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 F12P00748 615 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-224ENST00000554040 KCNA3P22001 575 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 TMF1P82094 1093 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 COG3Q96JB2 828 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.86
ATXN3-224ENST00000554040 DOT1LQ8TEK3 1739 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 TRAPPC3LQ5T215 181 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
ATXN3-224ENST00000554040 MYSM1Q5VVJ2 828 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 SLC24A3Q9HC58 644 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 ROCK2O75116 1388 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms