RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 LBX1P52954 281 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
TDP1-208ENST00000553989 PDIA6Q15084 440 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 USP50Q70EL3 339 aaPredicted RBP11.53□□□□□ -0.56
TDP1-208ENST00000553989 DDX46Q7L014 1031 aaKnown RBP11.53□□□□□ -0.56
TDP1-208ENST00000553989 COPS6Q7L5N1 327 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
TDP1-208ENST00000553989 TRMT112Q9UI30 125 aaKnown RBP11.53□□□□□ -0.56
TDP1-208ENST00000553989 HCLS1P14317 486 aaPredicted RBP11.52□□□□□ -0.57
TDP1-208ENST00000553989 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
TDP1-208ENST00000553989 ECE1P42892 770 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 RALBP1Q15311 655 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 MPNDQ8N594 471 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 ZNF428Q96B54 188 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 ADARB2Q9NS39 739 aaKnown RBP11.52□□□□□ -0.57
TDP1-208ENST00000553989 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 ZNRF3Q9ULT6 936 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 SH3TC1Q8TE82 1336 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 LTBP1Q14766 1721 aa11.52□□□□□ -0.57
TDP1-208ENST00000553989 TRAF5O00463 557 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 BBOX1O75936 387 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
TDP1-208ENST00000553989 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
TDP1-208ENST00000553989 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 LRP10Q7Z4F1 713 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 VPS33BQ9H267 617 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 GPRC5DQ9NZD1 345 aa11.51□□□□□ -0.57
TDP1-208ENST00000553989 RAD17O75943 681 aa11.5□□□□□ -0.57
TDP1-208ENST00000553989 GMPSP49915 693 aaPredicted RBP11.5□□□□□ -0.57
TDP1-208ENST00000553989 CXCL9Q07325 125 aa11.5□□□□□ -0.57
TDP1-208ENST00000553989 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
TDP1-208ENST00000553989 GRAPQ13588 217 aa11.5□□□□□ -0.57
TDP1-208ENST00000553989 CIAPIN1Q6FI81 312 aa11.5□□□□□ -0.57
TDP1-208ENST00000553989 GRAPLQ8TC17 118 aaPredicted RBP11.5□□□□□ -0.57
TDP1-208ENST00000553989 ZNF408Q9H9D4 720 aa11.5□□□□□ -0.57
TDP1-208ENST00000553989 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
TDP1-208ENST00000553989 TNIP1Q15025 636 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 KRT24Q2M2I5 525 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 CYP4F22Q6NT55 531 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 SP8Q8IXZ3 490 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
TDP1-208ENST00000553989 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
TDP1-208ENST00000553989 KIAA2012Q0VF49 1180 aa11.48□□□□□ -0.57
TDP1-208ENST00000553989 GPR101Q96P66 508 aaPredicted RBP11.48□□□□□ -0.57
TDP1-208ENST00000553989 RTFDC1Q9BY42 306 aaPredicted RBP11.48□□□□□ -0.57
TDP1-208ENST00000553989 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
TDP1-208ENST00000553989 LAMB2P55268 1798 aa11.47□□□□□ -0.57
TDP1-208ENST00000553989 CDHR2Q9BYE9 1310 aa11.47□□□□□ -0.57
TDP1-208ENST00000553989 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
TDP1-208ENST00000553989 CST9Q5W186 159 aa11.47□□□□□ -0.57
TDP1-208ENST00000553989 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
TDP1-208ENST00000553989 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
TDP1-208ENST00000553989 GLIS2Q9BZE0 524 aaPredicted RBP11.47□□□□□ -0.57
TDP1-208ENST00000553989 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
TDP1-208ENST00000553989 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
TDP1-208ENST00000553989 ATP5J2-PTCD1G3V325 749 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 H7C1D1 291 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 CHL1O00533 1208 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.57
TDP1-208ENST00000553989 WASHC4Q2M389 1173 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 PLBD2Q8NHP8 589 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
TDP1-208ENST00000553989 DBF4Q9UBU7 674 aaPredicted RBP11.46□□□□□ -0.57
TDP1-208ENST00000553989 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.58
TDP1-208ENST00000553989 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 AOC2O75106 756 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 HOXB7P09629 217 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 TRPM4Q8TD43 1214 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 ABHD8Q96I13 439 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 DBNDD1Q9H9R9 158 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 CNOT7Q9UIV1 285 aaKnown RBP11.45□□□□□ -0.58
TDP1-208ENST00000553989 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
TDP1-208ENST00000553989 YDJCA8MPS7 323 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 G3V3G9 751 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 CDC37L1Q7L3B6 337 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 RIC3Q7Z5B4 369 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 SAPCD2Q86UD0 394 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 ZC3H15Q8WU90 426 aaKnown RBP11.44□□□□□ -0.58
TDP1-208ENST00000553989 CELF1Q92879 486 aaKnown RBP11.44□□□□□ -0.58
TDP1-208ENST00000553989 YTHDC1Q96MU7 727 aaKnown RBP11.44□□□□□ -0.58
TDP1-208ENST00000553989 EYA3Q99504 573 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 HYPKQ9NX55 129 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
TDP1-208ENST00000553989 DUOX1Q9NRD9 1551 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms