RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 GRAPQ13588 217 aa29.53■■■□□ 2.32
NEK9-203ENST00000553945 GRAPLQ8TC17 118 aaPredicted RBP29.53■■■□□ 2.32
NEK9-203ENST00000553945 BBOX1O75936 387 aa29.52■■■□□ 2.32
NEK9-203ENST00000553945 CC2D2BQ6DHV5 1058 aa29.52■■■□□ 2.32
NEK9-203ENST00000553945 SLC51AQ86UW1 340 aa29.52■■■□□ 2.32
NEK9-203ENST00000553945 TMX4Q9H1E5 349 aaPredicted RBP29.52■■■□□ 2.32
NEK9-203ENST00000553945 RARSP54136 660 aaKnown RBP29.51■■■□□ 2.31
NEK9-203ENST00000553945 CCDC152Q4G0S7 254 aa29.51■■■□□ 2.31
NEK9-203ENST00000553945 CCDC85AQ96PX6 553 aaPredicted RBP29.51■■■□□ 2.31
NEK9-203ENST00000553945 ATP6V0A2Q9Y487 856 aa29.51■■■□□ 2.31
NEK9-203ENST00000553945 FKBP4Q02790 459 aaKnown RBP eCLIP29.5■■■□□ 2.31
NEK9-203ENST00000553945 ZNF526Q8TF50 670 aaPredicted RBP29.5■■■□□ 2.31
NEK9-203ENST00000553945 SRCIN1Q9C0H9 1055 aa29.5■■■□□ 2.31
NEK9-203ENST00000553945 CTSWP56202 376 aa29.49■■■□□ 2.31
NEK9-203ENST00000553945 MYH3P11055 1940 aa29.48■■■□□ 2.31
NEK9-203ENST00000553945 ALDH1L1O75891 902 aa29.48■■■□□ 2.31
NEK9-203ENST00000553945 CASP7P55210 303 aa29.48■■■□□ 2.31
NEK9-203ENST00000553945 CELF1Q92879 486 aaKnown RBP29.48■■■□□ 2.31
NEK9-203ENST00000553945 NOB1Q9ULX3 412 aaKnown RBP29.48■■■□□ 2.31
NEK9-203ENST00000553945 GRIPAP1Q4V328 841 aa29.47■■■□□ 2.31
NEK9-203ENST00000553945 SEC31BQ9NQW1 1179 aa29.47■■■□□ 2.31
NEK9-203ENST00000553945 TIAM2Q8IVF5 1701 aa29.47■■■□□ 2.31
NEK9-203ENST00000553945 SNED1Q8TER0 1413 aa29.46■■■□□ 2.31
NEK9-203ENST00000553945 TMC4Q7Z404 712 aa29.46■■■□□ 2.31
NEK9-203ENST00000553945 SP8Q8IXZ3 490 aa29.46■■■□□ 2.31
NEK9-203ENST00000553945 ZNF277Q9NRM2 450 aaPredicted RBP29.46■■■□□ 2.31
NEK9-203ENST00000553945 C9orf78Q9NZ63 289 aaPredicted RBP29.46■■■□□ 2.31
NEK9-203ENST00000553945 COL4A1P02462 1669 aa29.46■■■□□ 2.31
NEK9-203ENST00000553945 DICER1Q9UPY3 1922 aaKnown RBP29.45■■■□□ 2.31
NEK9-203ENST00000553945 GRM8O00222 908 aa29.45■■■□□ 2.31
NEK9-203ENST00000553945 BRPF1P55201 1214 aaPredicted RBP29.45■■■□□ 2.31
NEK9-203ENST00000553945 TTLL11Q8NHH1 800 aa29.45■■■□□ 2.31
NEK9-203ENST00000553945 RPS8P62241 208 aaKnown RBP29.44■■■□□ 2.3
NEK9-203ENST00000553945 PSMD1Q99460 953 aa29.44■■■□□ 2.3
NEK9-203ENST00000553945 PLA2G12BQ9BX93 195 aa29.43■■■□□ 2.3
NEK9-203ENST00000553945 GPBP1L1Q9HC44 474 aaPredicted RBP29.43■■■□□ 2.3
NEK9-203ENST00000553945 ZC3H4Q9UPT8 1303 aaKnown RBP29.43■■■□□ 2.3
NEK9-203ENST00000553945 GREM2Q9H772 168 aa29.42■■■□□ 2.3
NEK9-203ENST00000553945 KIF16BQ96L93 1317 aa29.42■■■□□ 2.3
NEK9-203ENST00000553945 LRRC37AA6NMS7 1700 aa29.41■■■□□ 2.3
NEK9-203ENST00000553945 DPP8Q6V1X1 898 aaPredicted RBP29.41■■■□□ 2.3
NEK9-203ENST00000553945 API5Q9BZZ5 524 aaKnown RBP29.41■■■□□ 2.3
NEK9-203ENST00000553945 BCAR3O75815 825 aa29.4■■■□□ 2.3
NEK9-203ENST00000553945 IARSP41252 1262 aaKnown RBP29.4■■■□□ 2.3
NEK9-203ENST00000553945 MPNDQ8N594 471 aa29.4■■■□□ 2.3
NEK9-203ENST00000553945 ANKRD18AQ8IVF6 992 aa29.39■■■□□ 2.3
NEK9-203ENST00000553945 CDC5LQ99459 802 aaKnown RBP29.39■■■□□ 2.3
NEK9-203ENST00000553945 RTL9Q8NET4 1388 aa29.39■■■□□ 2.29
NEK9-203ENST00000553945 CSF1RP07333 972 aa29.37■■■□□ 2.29
NEK9-203ENST00000553945 FOXO4P98177 505 aa29.37■■■□□ 2.29
NEK9-203ENST00000553945 FAM161AQ3B820 660 aa29.37■■■□□ 2.29
NEK9-203ENST00000553945 SUPT20HQ8NEM7 779 aa29.37■■■□□ 2.29
NEK9-203ENST00000553945 SPEF2Q9C093 1822 aa29.36■■■□□ 2.29
NEK9-203ENST00000553945 NBPF7P0C2Y1 421 aaPredicted RBP29.36■■■□□ 2.29
NEK9-203ENST00000553945 FRAT1Q92837 279 aaPredicted RBP29.36■■■□□ 2.29
NEK9-203ENST00000553945 KDM2BQ8NHM5 1336 aa29.36■■■□□ 2.29
NEK9-203ENST00000553945 IPO8O15397 1037 aaKnown RBP29.35■■■□□ 2.29
NEK9-203ENST00000553945 CCT4P50991 539 aaKnown RBP29.35■■■□□ 2.29
NEK9-203ENST00000553945 ARHGAP45Q92619 1136 aa29.35■■■□□ 2.29
NEK9-203ENST00000553945 RTFDC1Q9BY42 306 aaPredicted RBP29.35■■■□□ 2.29
NEK9-203ENST00000553945 NSFL1CQ9UNZ2 370 aaKnown RBP29.35■■■□□ 2.29
NEK9-203ENST00000553945 CHMP3Q9Y3E7 222 aa29.35■■■□□ 2.29
NEK9-203ENST00000553945 ITGA6P23229 1130 aa29.34■■■□□ 2.29
NEK9-203ENST00000553945 GPSM2P81274 684 aa29.34■■■□□ 2.29
NEK9-203ENST00000553945 EPHA10Q5JZY3 1008 aa29.34■■■□□ 2.29
NEK9-203ENST00000553945 LARGE2Q8N3Y3 721 aa29.34■■■□□ 2.29
NEK9-203ENST00000553945 UTYO14607 1347 aa29.34■■■□□ 2.29
NEK9-203ENST00000553945 PPIP5K2O43314 1243 aa29.33■■■□□ 2.29
NEK9-203ENST00000553945 LMBR1LQ6UX01 489 aa29.33■■■□□ 2.29
NEK9-203ENST00000553945 JDP2Q8WYK2 163 aa29.33■■■□□ 2.29
NEK9-203ENST00000553945 SUCLG2Q96I99 432 aa29.33■■■□□ 2.29
NEK9-203ENST00000553945 GLTPD2A6NH11 291 aa29.32■■■□□ 2.28
NEK9-203ENST00000553945 AOC3Q16853 763 aa29.32■■■□□ 2.28
NEK9-203ENST00000553945 DPY19L2Q6NUT2 758 aa29.32■■■□□ 2.28
NEK9-203ENST00000553945 DUOX1Q9NRD9 1551 aa29.31■■■□□ 2.28
NEK9-203ENST00000553945 IGHMBP2P38935 993 aaKnown RBP29.31■■■□□ 2.28
NEK9-203ENST00000553945 USP44Q9H0E7 712 aa29.31■■■□□ 2.28
NEK9-203ENST00000553945 NMRK2Q9NPI5 230 aa29.31■■■□□ 2.28
NEK9-203ENST00000553945 COL4A5P29400 1685 aa29.31■■■□□ 2.28
NEK9-203ENST00000553945 ANKRD18BA2A2Z9 1011 aa29.3■■■□□ 2.28
NEK9-203ENST00000553945 C6orf229H3BNL8 230 aa29.3■■■□□ 2.28
NEK9-203ENST00000553945 VPS33BQ9H267 617 aa29.3■■■□□ 2.28
NEK9-203ENST00000553945 ANKIB1Q9P2G1 1089 aa29.3■■■□□ 2.28
NEK9-203ENST00000553945 IFIT5Q13325 482 aaKnown RBP29.29■■■□□ 2.28
NEK9-203ENST00000553945 ATF7IPQ6VMQ6 1270 aa29.29■■■□□ 2.28
NEK9-203ENST00000553945 KAZALD1Q96I82 304 aa29.29■■■□□ 2.28
NEK9-203ENST00000553945 BSDC1Q9NW68 430 aaPredicted RBP29.29■■■□□ 2.28
NEK9-203ENST00000553945 LTBP1Q14766 1721 aa29.28■■■□□ 2.28
NEK9-203ENST00000553945 TRIM27P14373 513 aa29.28■■■□□ 2.28
NEK9-203ENST00000553945 NIM1KQ8IY84 436 aa29.28■■■□□ 2.28
NEK9-203ENST00000553945 MPHOSPH8Q99549 860 aa29.28■■■□□ 2.28
NEK9-203ENST00000553945 POLLQ9UGP5 575 aa29.28■■■□□ 2.28
NEK9-203ENST00000553945 TNNQ9UQP3 1299 aa29.28■■■□□ 2.28
NEK9-203ENST00000553945 CCDC57Q2TAC2 916 aa29.27■■■□□ 2.28
NEK9-203ENST00000553945 ZKSCAN2Q63HK3 967 aa29.27■■■□□ 2.28
NEK9-203ENST00000553945 TBC1D16Q8TBP0 767 aa29.27■■■□□ 2.28
NEK9-203ENST00000553945 BICC1Q9H694 974 aaKnown RBP29.27■■■□□ 2.28
NEK9-203ENST00000553945 RRAGCQ9HB90 399 aa29.27■■■□□ 2.28
NEK9-203ENST00000553945 PODXL2Q9NZ53 605 aa29.27■■■□□ 2.28
NEK9-203ENST00000553945 ZNF541Q9H0D2 1346 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms