RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 CDHR2Q9BYE9 1310 aa26.01■■□□□ 1.75
XRCC3-205ENST00000553807 COL4A1P02462 1669 aa26■■□□□ 1.75
XRCC3-205ENST00000553807 PDE8AO60658 829 aa26■■□□□ 1.75
XRCC3-205ENST00000553807 UBE3BQ7Z3V4 1068 aa26■■□□□ 1.75
XRCC3-205ENST00000553807 LINS1Q8NG48 757 aa26■■□□□ 1.75
XRCC3-205ENST00000553807 CCDC85AQ96PX6 553 aaPredicted RBP26■■□□□ 1.75
XRCC3-205ENST00000553807 IARSP41252 1262 aaKnown RBP25.99■■□□□ 1.75
XRCC3-205ENST00000553807 HNRNPUQ00839 825 aaKnown RBP eCLIP25.99■■□□□ 1.75
XRCC3-205ENST00000553807 GCKRQ14397 625 aa25.99■■□□□ 1.75
XRCC3-205ENST00000553807 TRMT2AQ8IZ69 625 aaKnown RBP25.99■■□□□ 1.75
XRCC3-205ENST00000553807 CELF1Q92879 486 aaKnown RBP25.99■■□□□ 1.75
XRCC3-205ENST00000553807 BCL2L13Q9BXK5 485 aa25.99■■□□□ 1.75
XRCC3-205ENST00000553807 KIF3CO14782 793 aa25.98■■□□□ 1.75
XRCC3-205ENST00000553807 CCDC152Q4G0S7 254 aa25.98■■□□□ 1.75
XRCC3-205ENST00000553807 GRIPAP1Q4V328 841 aa25.98■■□□□ 1.75
XRCC3-205ENST00000553807 MRPL50Q8N5N7 158 aaKnown RBP25.98■■□□□ 1.75
XRCC3-205ENST00000553807 GLTPD2A6NH11 291 aa25.97■■□□□ 1.75
XRCC3-205ENST00000553807 C1QTNF8P60827 252 aa25.97■■□□□ 1.75
XRCC3-205ENST00000553807 SP8Q8IXZ3 490 aa25.97■■□□□ 1.75
XRCC3-205ENST00000553807 SSH1Q8WYL5 1049 aa25.97■■□□□ 1.75
XRCC3-205ENST00000553807 CTSWP56202 376 aa25.96■■□□□ 1.75
XRCC3-205ENST00000553807 SLC4A10Q6U841 1118 aa25.96■■□□□ 1.75
XRCC3-205ENST00000553807 SEC31BQ9NQW1 1179 aa25.96■■□□□ 1.75
XRCC3-205ENST00000553807 LRRC37AA6NMS7 1700 aa25.96■■□□□ 1.75
XRCC3-205ENST00000553807 H7C1W4 665 aa25.95■■□□□ 1.74
XRCC3-205ENST00000553807 BEND3Q5T5X7 828 aa25.95■■□□□ 1.74
XRCC3-205ENST00000553807 DPP8Q6V1X1 898 aaPredicted RBP25.95■■□□□ 1.74
XRCC3-205ENST00000553807 TMC4Q7Z404 712 aa25.95■■□□□ 1.74
XRCC3-205ENST00000553807 DPY19L2Q6NUT2 758 aa25.94■■□□□ 1.74
XRCC3-205ENST00000553807 RRAGCQ9HB90 399 aa25.94■■□□□ 1.74
XRCC3-205ENST00000553807 SMC4Q9NTJ3 1288 aa25.94■■□□□ 1.74
XRCC3-205ENST00000553807 MYH3P11055 1940 aa25.94■■□□□ 1.74
XRCC3-205ENST00000553807 COL4A5P29400 1685 aa25.93■■□□□ 1.74
XRCC3-205ENST00000553807 LARGE2Q8N3Y3 721 aa25.93■■□□□ 1.74
XRCC3-205ENST00000553807 MPNDQ8N594 471 aa25.93■■□□□ 1.74
XRCC3-205ENST00000553807 ZNF541Q9H0D2 1346 aa25.92■■□□□ 1.74
XRCC3-205ENST00000553807 RPS8P62241 208 aaKnown RBP25.92■■□□□ 1.74
XRCC3-205ENST00000553807 JDP2Q8WYK2 163 aa25.92■■□□□ 1.74
XRCC3-205ENST00000553807 PPIP5K2O43314 1243 aa25.91■■□□□ 1.74
XRCC3-205ENST00000553807 CASP7P55210 303 aa25.91■■□□□ 1.74
XRCC3-205ENST00000553807 ALDH1L2Q3SY69 923 aa25.91■■□□□ 1.74
XRCC3-205ENST00000553807 C16orf71Q8IYS4 520 aaPredicted RBP25.91■■□□□ 1.74
XRCC3-205ENST00000553807 SUPT20HQ8NEM7 779 aa25.91■■□□□ 1.74
XRCC3-205ENST00000553807 DUOX1Q9NRD9 1551 aa25.9■■□□□ 1.74
XRCC3-205ENST00000553807 PTPRCP08575 1304 aa25.9■■□□□ 1.74
XRCC3-205ENST00000553807 CT47B1P0C2W7 299 aaPredicted RBP25.9■■□□□ 1.74
XRCC3-205ENST00000553807 AOC3Q16853 763 aa25.9■■□□□ 1.74
XRCC3-205ENST00000553807 TTLL11Q8NHH1 800 aa25.9■■□□□ 1.74
XRCC3-205ENST00000553807 GREM2Q9H772 168 aa25.9■■□□□ 1.74
XRCC3-205ENST00000553807 WDR90Q96KV7 1748 aa25.89■■□□□ 1.74
XRCC3-205ENST00000553807 DDNO94850 711 aaPredicted RBP25.89■■□□□ 1.74
XRCC3-205ENST00000553807 RTFDC1Q9BY42 306 aaPredicted RBP25.89■■□□□ 1.74
XRCC3-205ENST00000553807 SRCIN1Q9C0H9 1055 aa25.89■■□□□ 1.74
XRCC3-205ENST00000553807 ANKRD18AQ8IVF6 992 aa25.88■■□□□ 1.73
XRCC3-205ENST00000553807 NIM1KQ8IY84 436 aa25.88■■□□□ 1.73
XRCC3-205ENST00000553807 NSFL1CQ9UNZ2 370 aaKnown RBP25.88■■□□□ 1.73
XRCC3-205ENST00000553807 SPEF2Q9C093 1822 aa25.87■■□□□ 1.73
XRCC3-205ENST00000553807 ALDH1L1O75891 902 aa25.87■■□□□ 1.73
XRCC3-205ENST00000553807 GPSM2P81274 684 aa25.87■■□□□ 1.73
XRCC3-205ENST00000553807 CDC5LQ99459 802 aaKnown RBP25.87■■□□□ 1.73
XRCC3-205ENST00000553807 PLA2G12BQ9BX93 195 aa25.87■■□□□ 1.73
XRCC3-205ENST00000553807 RTL9Q8NET4 1388 aa25.86■■□□□ 1.73
XRCC3-205ENST00000553807 FZD9O00144 591 aa25.86■■□□□ 1.73
XRCC3-205ENST00000553807 GRM8O00222 908 aa25.86■■□□□ 1.73
XRCC3-205ENST00000553807 TOMM70O94826 608 aa25.86■■□□□ 1.73
XRCC3-205ENST00000553807 VEGFAP15692 232 aaPredicted RBP25.86■■□□□ 1.73
XRCC3-205ENST00000553807 FAM161AQ3B820 660 aa25.86■■□□□ 1.73
XRCC3-205ENST00000553807 C9orf78Q9NZ63 289 aaPredicted RBP25.86■■□□□ 1.73
XRCC3-205ENST00000553807 EIF6P56537 245 aaKnown RBP25.85■■□□□ 1.73
XRCC3-205ENST00000553807 LTBP1Q14766 1721 aa25.85■■□□□ 1.73
XRCC3-205ENST00000553807 C6orf229H3BNL8 230 aa25.84■■□□□ 1.73
XRCC3-205ENST00000553807 KIAA2012Q0VF49 1180 aa25.83■■□□□ 1.73
XRCC3-205ENST00000553807 VPS33BQ9H267 617 aa25.83■■□□□ 1.73
XRCC3-205ENST00000553807 ANKIB1Q9P2G1 1089 aa25.83■■□□□ 1.73
XRCC3-205ENST00000553807 CHMP3Q9Y3E7 222 aa25.83■■□□□ 1.73
XRCC3-205ENST00000553807 POTECB2RU33 542 aa25.82■■□□□ 1.72
XRCC3-205ENST00000553807 ITGA6P23229 1130 aa25.82■■□□□ 1.72
XRCC3-205ENST00000553807 POLLQ9UGP5 575 aa25.82■■□□□ 1.72
XRCC3-205ENST00000553807 GJA3Q9Y6H8 435 aa25.82■■□□□ 1.72
XRCC3-205ENST00000553807 UFL1O94874 794 aa25.81■■□□□ 1.72
XRCC3-205ENST00000553807 RARSP54136 660 aaKnown RBP25.81■■□□□ 1.72
XRCC3-205ENST00000553807 RBM46Q8TBY0 533 aaKnown RBP25.81■■□□□ 1.72
XRCC3-205ENST00000553807 GPR101Q96P66 508 aaPredicted RBP25.81■■□□□ 1.72
XRCC3-205ENST00000553807 NOB1Q9ULX3 412 aaKnown RBP25.81■■□□□ 1.72
XRCC3-205ENST00000553807 ZBED9Q6R2W3 1325 aa25.81■■□□□ 1.72
XRCC3-205ENST00000553807 RIMBP2O15034 1052 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 CSF1RP07333 972 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 IGHMBP2P38935 993 aaKnown RBP25.8■■□□□ 1.72
XRCC3-205ENST00000553807 FOXO4P98177 505 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 WASHC4Q2M389 1173 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 GPC2Q8N158 579 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 TBC1D16Q8TBP0 767 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 L3MBTL3Q96JM7 780 aaPredicted RBP25.8■■□□□ 1.72
XRCC3-205ENST00000553807 ZNRF3Q9ULT6 936 aa25.8■■□□□ 1.72
XRCC3-205ENST00000553807 EPHA10Q5JZY3 1008 aa25.79■■□□□ 1.72
XRCC3-205ENST00000553807 EYA3Q99504 573 aa25.79■■□□□ 1.72
XRCC3-205ENST00000553807 GGA1Q9UJY5 639 aa25.79■■□□□ 1.72
XRCC3-205ENST00000553807 IQCA1LA6NCM1 817 aa25.78■■□□□ 1.72
XRCC3-205ENST00000553807 NBPF7P0C2Y1 421 aaPredicted RBP25.78■■□□□ 1.72
XRCC3-205ENST00000553807 LMBR1LQ6UX01 489 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms