RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 BBOX1O75936 387 aa25.97■■□□□ 1.75
FOXA1-203ENST00000553751 GCKRQ14397 625 aa25.97■■□□□ 1.75
FOXA1-203ENST00000553751 MRPL50Q8N5N7 158 aaKnown RBP25.97■■□□□ 1.75
FOXA1-203ENST00000553751 ZNF277Q9NRM2 450 aaPredicted RBP25.97■■□□□ 1.75
FOXA1-203ENST00000553751 PDE8AO60658 829 aa25.96■■□□□ 1.75
FOXA1-203ENST00000553751 GRIPAP1Q4V328 841 aa25.96■■□□□ 1.75
FOXA1-203ENST00000553751 SSH1Q8WYL5 1049 aa25.96■■□□□ 1.75
FOXA1-203ENST00000553751 CELF1Q92879 486 aaKnown RBP25.95■■□□□ 1.74
FOXA1-203ENST00000553751 KDM2BQ8NHM5 1336 aa25.94■■□□□ 1.74
FOXA1-203ENST00000553751 H7C1W4 665 aa25.94■■□□□ 1.74
FOXA1-203ENST00000553751 BEND3Q5T5X7 828 aa25.94■■□□□ 1.74
FOXA1-203ENST00000553751 SP8Q8IXZ3 490 aa25.94■■□□□ 1.74
FOXA1-203ENST00000553751 NMRK2Q9NPI5 230 aa25.94■■□□□ 1.74
FOXA1-203ENST00000553751 KIF3CO14782 793 aa25.93■■□□□ 1.74
FOXA1-203ENST00000553751 HNRNPUQ00839 825 aaKnown RBP eCLIP25.93■■□□□ 1.74
FOXA1-203ENST00000553751 UBE3BQ7Z3V4 1068 aa25.93■■□□□ 1.74
FOXA1-203ENST00000553751 GLTPD2A6NH11 291 aa25.92■■□□□ 1.74
FOXA1-203ENST00000553751 CT47B1P0C2W7 299 aaPredicted RBP25.92■■□□□ 1.74
FOXA1-203ENST00000553751 IARSP41252 1262 aaKnown RBP25.92■■□□□ 1.74
FOXA1-203ENST00000553751 CASP7P55210 303 aa25.92■■□□□ 1.74
FOXA1-203ENST00000553751 CCDC152Q4G0S7 254 aa25.92■■□□□ 1.74
FOXA1-203ENST00000553751 TMC4Q7Z404 712 aa25.92■■□□□ 1.74
FOXA1-203ENST00000553751 TMX4Q9H1E5 349 aaPredicted RBP25.92■■□□□ 1.74
FOXA1-203ENST00000553751 COL4A5P29400 1685 aa25.92■■□□□ 1.74
FOXA1-203ENST00000553751 MYH3P11055 1940 aa25.92■■□□□ 1.74
FOXA1-203ENST00000553751 CTSWP56202 376 aa25.91■■□□□ 1.74
FOXA1-203ENST00000553751 ALDH1L2Q3SY69 923 aa25.91■■□□□ 1.74
FOXA1-203ENST00000553751 BCL2L13Q9BXK5 485 aa25.91■■□□□ 1.74
FOXA1-203ENST00000553751 SEC31BQ9NQW1 1179 aa25.91■■□□□ 1.74
FOXA1-203ENST00000553751 DUOX1Q9NRD9 1551 aa25.9■■□□□ 1.74
FOXA1-203ENST00000553751 PTPRCP08575 1304 aa25.89■■□□□ 1.74
FOXA1-203ENST00000553751 CCDC85AQ96PX6 553 aaPredicted RBP25.89■■□□□ 1.74
FOXA1-203ENST00000553751 RTFDC1Q9BY42 306 aaPredicted RBP25.89■■□□□ 1.74
FOXA1-203ENST00000553751 C1QTNF8P60827 252 aa25.88■■□□□ 1.73
FOXA1-203ENST00000553751 TTLL11Q8NHH1 800 aa25.88■■□□□ 1.73
FOXA1-203ENST00000553751 PLA2G12BQ9BX93 195 aa25.88■■□□□ 1.73
FOXA1-203ENST00000553751 LTBP1Q14766 1721 aa25.88■■□□□ 1.73
FOXA1-203ENST00000553751 RTL9Q8NET4 1388 aa25.87■■□□□ 1.73
FOXA1-203ENST00000553751 RPS8P62241 208 aaKnown RBP25.87■■□□□ 1.73
FOXA1-203ENST00000553751 SLC4A10Q6U841 1118 aa25.87■■□□□ 1.73
FOXA1-203ENST00000553751 DPP8Q6V1X1 898 aaPredicted RBP25.87■■□□□ 1.73
FOXA1-203ENST00000553751 MPNDQ8N594 471 aa25.87■■□□□ 1.73
FOXA1-203ENST00000553751 SMC4Q9NTJ3 1288 aa25.87■■□□□ 1.73
FOXA1-203ENST00000553751 WDR90Q96KV7 1748 aa25.87■■□□□ 1.73
FOXA1-203ENST00000553751 DPY19L2Q6NUT2 758 aa25.86■■□□□ 1.73
FOXA1-203ENST00000553751 ZNF541Q9H0D2 1346 aa25.86■■□□□ 1.73
FOXA1-203ENST00000553751 ALDH1L1O75891 902 aa25.85■■□□□ 1.73
FOXA1-203ENST00000553751 SRCIN1Q9C0H9 1055 aa25.85■■□□□ 1.73
FOXA1-203ENST00000553751 GREM2Q9H772 168 aa25.85■■□□□ 1.73
FOXA1-203ENST00000553751 RRAGCQ9HB90 399 aa25.85■■□□□ 1.73
FOXA1-203ENST00000553751 FZD9O00144 591 aa25.84■■□□□ 1.73
FOXA1-203ENST00000553751 LARGE2Q8N3Y3 721 aa25.84■■□□□ 1.73
FOXA1-203ENST00000553751 SUPT20HQ8NEM7 779 aa25.84■■□□□ 1.73
FOXA1-203ENST00000553751 GRM8O00222 908 aa25.83■■□□□ 1.73
FOXA1-203ENST00000553751 AOC3Q16853 763 aa25.83■■□□□ 1.73
FOXA1-203ENST00000553751 JDP2Q8WYK2 163 aa25.83■■□□□ 1.73
FOXA1-203ENST00000553751 VPS33BQ9H267 617 aa25.83■■□□□ 1.73
FOXA1-203ENST00000553751 PPIP5K2O43314 1243 aa25.82■■□□□ 1.72
FOXA1-203ENST00000553751 DDNO94850 711 aaPredicted RBP25.82■■□□□ 1.72
FOXA1-203ENST00000553751 GPSM2P81274 684 aa25.82■■□□□ 1.72
FOXA1-203ENST00000553751 ZBED9Q6R2W3 1325 aa25.82■■□□□ 1.72
FOXA1-203ENST00000553751 POTECB2RU33 542 aa25.81■■□□□ 1.72
FOXA1-203ENST00000553751 CSF1RP07333 972 aa25.81■■□□□ 1.72
FOXA1-203ENST00000553751 RARSP54136 660 aaKnown RBP25.81■■□□□ 1.72
FOXA1-203ENST00000553751 BRPF1P55201 1214 aaPredicted RBP25.81■■□□□ 1.72
FOXA1-203ENST00000553751 ANKRD18AQ8IVF6 992 aa25.81■■□□□ 1.72
FOXA1-203ENST00000553751 CDC5LQ99459 802 aaKnown RBP25.81■■□□□ 1.72
FOXA1-203ENST00000553751 NSFL1CQ9UNZ2 370 aaKnown RBP25.81■■□□□ 1.72
FOXA1-203ENST00000553751 SPEF2Q9C093 1822 aa25.8■■□□□ 1.72
FOXA1-203ENST00000553751 KIAA2012Q0VF49 1180 aa25.8■■□□□ 1.72
FOXA1-203ENST00000553751 FAM161AQ3B820 660 aa25.8■■□□□ 1.72
FOXA1-203ENST00000553751 TOMM70O94826 608 aa25.79■■□□□ 1.72
FOXA1-203ENST00000553751 FOXO4P98177 505 aa25.79■■□□□ 1.72
FOXA1-203ENST00000553751 NIM1KQ8IY84 436 aa25.79■■□□□ 1.72
FOXA1-203ENST00000553751 L3MBTL3Q96JM7 780 aaPredicted RBP25.79■■□□□ 1.72
FOXA1-203ENST00000553751 C9orf78Q9NZ63 289 aaPredicted RBP25.79■■□□□ 1.72
FOXA1-203ENST00000553751 VEGFAP15692 232 aaPredicted RBP25.78■■□□□ 1.72
FOXA1-203ENST00000553751 PODXL2Q9NZ53 605 aa25.78■■□□□ 1.72
FOXA1-203ENST00000553751 POLLQ9UGP5 575 aa25.78■■□□□ 1.72
FOXA1-203ENST00000553751 ITGA6P23229 1130 aa25.77■■□□□ 1.72
FOXA1-203ENST00000553751 EPHA10Q5JZY3 1008 aa25.77■■□□□ 1.72
FOXA1-203ENST00000553751 NOB1Q9ULX3 412 aaKnown RBP25.77■■□□□ 1.72
FOXA1-203ENST00000553751 UTYO14607 1347 aa25.77■■□□□ 1.72
FOXA1-203ENST00000553751 C16orf71Q8IYS4 520 aaPredicted RBP25.76■■□□□ 1.71
FOXA1-203ENST00000553751 TBC1D16Q8TBP0 767 aa25.76■■□□□ 1.71
FOXA1-203ENST00000553751 BSDC1Q9NW68 430 aaPredicted RBP25.76■■□□□ 1.71
FOXA1-203ENST00000553751 NBPF7P0C2Y1 421 aaPredicted RBP25.75■■□□□ 1.71
FOXA1-203ENST00000553751 EIF6P56537 245 aaKnown RBP25.75■■□□□ 1.71
FOXA1-203ENST00000553751 GPC2Q8N158 579 aa25.75■■□□□ 1.71
FOXA1-203ENST00000553751 RBM46Q8TBY0 533 aaKnown RBP25.75■■□□□ 1.71
FOXA1-203ENST00000553751 KIF16BQ96L93 1317 aa25.74■■□□□ 1.71
FOXA1-203ENST00000553751 C6orf229H3BNL8 230 aa25.74■■□□□ 1.71
FOXA1-203ENST00000553751 WASHC4Q2M389 1173 aa25.74■■□□□ 1.71
FOXA1-203ENST00000553751 ANKIB1Q9P2G1 1089 aa25.74■■□□□ 1.71
FOXA1-203ENST00000553751 ZNRF3Q9ULT6 936 aa25.74■■□□□ 1.71
FOXA1-203ENST00000553751 SCN4AP35499 1836 aa25.74■■□□□ 1.71
FOXA1-203ENST00000553751 XDHP47989 1333 aa25.73■■□□□ 1.71
FOXA1-203ENST00000553751 LMBR1LQ6UX01 489 aa25.73■■□□□ 1.71
FOXA1-203ENST00000553751 KAZALD1Q96I82 304 aa25.73■■□□□ 1.71
FOXA1-203ENST00000553751 SUCLG2Q96I99 432 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms