RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
ABCD4-219ENST00000553745 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-219ENST00000553745 PDE8AO60658 829 aa17.36■□□□□ 0.37
ABCD4-219ENST00000553745 NFIXQ14938 502 aa17.36■□□□□ 0.37
ABCD4-219ENST00000553745 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-219ENST00000553745 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-219ENST00000553745 CSF1RP07333 972 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 PTPN12Q05209 780 aaKnown RBP17.35■□□□□ 0.37
ABCD4-219ENST00000553745 ERFEQ4G0M1 354 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-219ENST00000553745 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 SIL1Q9H173 461 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 STK32BQ9NY57 414 aa17.35■□□□□ 0.37
ABCD4-219ENST00000553745 LRP5O75197 1615 aa17.34■□□□□ 0.37
ABCD4-219ENST00000553745 TTLL11Q8NHH1 800 aa17.34■□□□□ 0.37
ABCD4-219ENST00000553745 LRRCC1Q9C099 1032 aa17.34■□□□□ 0.37
ABCD4-219ENST00000553745 NYXQ9GZU5 481 aa17.34■□□□□ 0.37
ABCD4-219ENST00000553745 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
ABCD4-219ENST00000553745 COPRSQ9NQ92 184 aa17.33■□□□□ 0.37
ABCD4-219ENST00000553745 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.37
ABCD4-219ENST00000553745 NRXN2Q9P2S2 1712 aa17.33■□□□□ 0.36
ABCD4-219ENST00000553745 RAB11FIP3O75154 756 aa17.33■□□□□ 0.36
ABCD4-219ENST00000553745 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
ABCD4-219ENST00000553745 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
ABCD4-219ENST00000553745 GREM2Q9H772 168 aa17.33■□□□□ 0.36
ABCD4-219ENST00000553745 RHPN1Q8TCX5 695 aa17.32■□□□□ 0.36
ABCD4-219ENST00000553745 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-219ENST00000553745 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
ABCD4-219ENST00000553745 COL4A1P02462 1669 aa17.32■□□□□ 0.36
ABCD4-219ENST00000553745 TAF1P21675 1872 aa17.32■□□□□ 0.36
ABCD4-219ENST00000553745 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-219ENST00000553745 TM4SF1P30408 202 aa17.31■□□□□ 0.36
ABCD4-219ENST00000553745 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
ABCD4-219ENST00000553745 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
ABCD4-219ENST00000553745 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
ABCD4-219ENST00000553745 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
ABCD4-219ENST00000553745 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
ABCD4-219ENST00000553745 ITGA6P23229 1130 aa17.3■□□□□ 0.36
ABCD4-219ENST00000553745 DDR1Q08345 913 aa17.3■□□□□ 0.36
ABCD4-219ENST00000553745 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.36
ABCD4-219ENST00000553745 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
ABCD4-219ENST00000553745 C3orf67Q6ZVT6 689 aa17.3■□□□□ 0.36
ABCD4-219ENST00000553745 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-219ENST00000553745 SASH1O94885 1247 aa17.3■□□□□ 0.36
ABCD4-219ENST00000553745 IFIT5Q13325 482 aaKnown RBP17.3■□□□□ 0.36
ABCD4-219ENST00000553745 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
ABCD4-219ENST00000553745 OTUD7AQ8TE49 926 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-219ENST00000553745 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
ABCD4-219ENST00000553745 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
ABCD4-219ENST00000553745 NPHP1O15259 732 aa17.29■□□□□ 0.36
ABCD4-219ENST00000553745 CNBD1Q8NA66 436 aa17.29■□□□□ 0.36
ABCD4-219ENST00000553745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.29■□□□□ 0.36
ABCD4-219ENST00000553745 A0A1B0GUL6 1792 aa17.29■□□□□ 0.36
ABCD4-219ENST00000553745 SERPINB2P05120 415 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 MSL1Q68DK7 614 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 PRR5LQ6MZQ0 368 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 UPF1Q92900 1129 aaKnown RBP eCLIP17.28■□□□□ 0.36
ABCD4-219ENST00000553745 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 LRRC24Q50LG9 513 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 TAF7LQ5H9L4 462 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 NLGN1Q8N2Q7 840 aa17.28■□□□□ 0.36
ABCD4-219ENST00000553745 ATG9AQ7Z3C6 839 aa17.27■□□□□ 0.35
ABCD4-219ENST00000553745 PLEKHM2Q8IWE5 1019 aa17.27■□□□□ 0.35
ABCD4-219ENST00000553745 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.35
ABCD4-219ENST00000553745 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.35
ABCD4-219ENST00000553745 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.35
ABCD4-219ENST00000553745 EYA2O00167 538 aa17.26■□□□□ 0.35
ABCD4-219ENST00000553745 BECN1Q14457 450 aa17.26■□□□□ 0.35
ABCD4-219ENST00000553745 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
ABCD4-219ENST00000553745 CIAO1O76071 339 aa17.25■□□□□ 0.35
ABCD4-219ENST00000553745 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
ABCD4-219ENST00000553745 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-219ENST00000553745 MMP10P09238 476 aa17.25■□□□□ 0.35
ABCD4-219ENST00000553745 IL15P40933 162 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-219ENST00000553745 ST5P78524 1137 aa17.25■□□□□ 0.35
ABCD4-219ENST00000553745 TFCP2Q12800 502 aa17.25■□□□□ 0.35
ABCD4-219ENST00000553745 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
ABCD4-219ENST00000553745 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
ABCD4-219ENST00000553745 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
ABCD4-219ENST00000553745 MFAP1P55081 439 aaKnown RBP17.24■□□□□ 0.35
ABCD4-219ENST00000553745 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
ABCD4-219ENST00000553745 COL11A2P13942 1736 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-219ENST00000553745 ZNF609O15014 1411 aa17.24■□□□□ 0.35
ABCD4-219ENST00000553745 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
ABCD4-219ENST00000553745 MX1P20591 662 aa17.23■□□□□ 0.35
ABCD4-219ENST00000553745 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
ABCD4-219ENST00000553745 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
ABCD4-219ENST00000553745 AACSQ86V21 672 aa17.23■□□□□ 0.35
ABCD4-219ENST00000553745 PDE1AP54750 535 aa17.22■□□□□ 0.35
ABCD4-219ENST00000553745 ARAP2Q8WZ64 1704 aa17.22■□□□□ 0.35
ABCD4-219ENST00000553745 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
ABCD4-219ENST00000553745 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
ABCD4-219ENST00000553745 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms