RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 PPIP5K2O43314 1243 aa23.57■■□□□ 1.36
CLMN-202ENST00000553733 EPHX2P34913 555 aa23.57■■□□□ 1.36
CLMN-202ENST00000553733 DDX46Q7L014 1031 aaKnown RBP23.57■■□□□ 1.36
CLMN-202ENST00000553733 LDHDQ86WU2 507 aa23.57■■□□□ 1.36
CLMN-202ENST00000553733 SP8Q8IXZ3 490 aa23.57■■□□□ 1.36
CLMN-202ENST00000553733 SCNN1DP51172 638 aa23.56■■□□□ 1.36
CLMN-202ENST00000553733 RIC3Q7Z5B4 369 aa23.56■■□□□ 1.36
CLMN-202ENST00000553733 CELF1Q92879 486 aaKnown RBP23.56■■□□□ 1.36
CLMN-202ENST00000553733 ZNF646O15015 1829 aaPredicted RBP23.55■■□□□ 1.36
CLMN-202ENST00000553733 ANP32CO43423 234 aa23.55■■□□□ 1.36
CLMN-202ENST00000553733 BBOX1O75936 387 aa23.55■■□□□ 1.36
CLMN-202ENST00000553733 SF3B3Q15393 1217 aaKnown RBP23.55■■□□□ 1.36
CLMN-202ENST00000553733 MYD88Q99836 296 aa23.55■■□□□ 1.36
CLMN-202ENST00000553733 A0A1B0GUL6 1792 aa23.55■■□□□ 1.36
CLMN-202ENST00000553733 EIF6P56537 245 aaKnown RBP23.54■■□□□ 1.36
CLMN-202ENST00000553733 EAPPQ56P03 285 aaPredicted RBP23.54■■□□□ 1.36
CLMN-202ENST00000553733 CCDC30Q5VVM6 783 aa23.54■■□□□ 1.36
CLMN-202ENST00000553733 NIM1KQ8IY84 436 aa23.54■■□□□ 1.36
CLMN-202ENST00000553733 GJA3Q9Y6H8 435 aa23.54■■□□□ 1.36
CLMN-202ENST00000553733 IRS4O14654 1257 aaPredicted RBP23.53■■□□□ 1.36
CLMN-202ENST00000553733 DPP8Q6V1X1 898 aaPredicted RBP23.53■■□□□ 1.36
CLMN-202ENST00000553733 ZBTB38Q8NAP3 1195 aaPredicted RBP23.53■■□□□ 1.36
CLMN-202ENST00000553733 IL16Q14005 1332 aa23.53■■□□□ 1.36
CLMN-202ENST00000553733 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
CLMN-202ENST00000553733 MPNDQ8N594 471 aa23.52■■□□□ 1.36
CLMN-202ENST00000553733 METTL22Q9BUU2 404 aaPredicted RBP23.52■■□□□ 1.36
CLMN-202ENST00000553733 ITGBL1O95965 494 aaPredicted RBP23.51■■□□□ 1.35
CLMN-202ENST00000553733 KIAA2012Q0VF49 1180 aa23.51■■□□□ 1.35
CLMN-202ENST00000553733 NCBP3Q53F19 620 aaKnown RBP23.51■■□□□ 1.35
CLMN-202ENST00000553733 TWISTNBQ3B726 338 aaPredicted RBP23.5■■□□□ 1.35
CLMN-202ENST00000553733 G2E3Q7L622 706 aa23.5■■□□□ 1.35
CLMN-202ENST00000553733 SUPT20HQ8NEM7 779 aa23.5■■□□□ 1.35
CLMN-202ENST00000553733 JARID2Q92833 1246 aaPredicted RBP23.5■■□□□ 1.35
CLMN-202ENST00000553733 VPS33BQ9H267 617 aa23.5■■□□□ 1.35
CLMN-202ENST00000553733 CREBZFQ9NS37 354 aa23.5■■□□□ 1.35
CLMN-202ENST00000553733 MAP3K2Q9Y2U5 619 aa23.5■■□□□ 1.35
CLMN-202ENST00000553733 PCCAP05165 728 aaPredicted RBP23.49■■□□□ 1.35
CLMN-202ENST00000553733 IGKV5-2P06315 115 aa23.49■■□□□ 1.35
CLMN-202ENST00000553733 EPS15P42566 896 aa23.49■■□□□ 1.35
CLMN-202ENST00000553733 TMC4Q7Z404 712 aa23.49■■□□□ 1.35
CLMN-202ENST00000553733 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
CLMN-202ENST00000553733 TMX4Q9H1E5 349 aaPredicted RBP23.49■■□□□ 1.35
CLMN-202ENST00000553733 THSD7BQ9C0I4 1608 aa23.48■■□□□ 1.35
CLMN-202ENST00000553733 YDJCA8MPS7 323 aa23.48■■□□□ 1.35
CLMN-202ENST00000553733 CXCL9Q07325 125 aa23.48■■□□□ 1.35
CLMN-202ENST00000553733 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
CLMN-202ENST00000553733 PNMA8AQ86V59 439 aaPredicted RBP23.48■■□□□ 1.35
CLMN-202ENST00000553733 SEC31BQ9NQW1 1179 aa23.48■■□□□ 1.35
CLMN-202ENST00000553733 ZNRF3Q9ULT6 936 aa23.48■■□□□ 1.35
CLMN-202ENST00000553733 POLR2AP24928 1970 aaKnown RBP23.48■■□□□ 1.35
CLMN-202ENST00000553733 PI4KAP2A4QPH2 592 aa23.47■■□□□ 1.35
CLMN-202ENST00000553733 PI4KAP1Q8N8J0 262 aa23.47■■□□□ 1.35
CLMN-202ENST00000553733 CWC25Q9NXE8 425 aaPredicted RBP23.47■■□□□ 1.35
CLMN-202ENST00000553733 DDX58O95786 925 aaKnown RBP23.46■■□□□ 1.35
CLMN-202ENST00000553733 GPSM2P81274 684 aa23.46■■□□□ 1.35
CLMN-202ENST00000553733 KSR2Q6VAB6 950 aa23.46■■□□□ 1.35
CLMN-202ENST00000553733 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
CLMN-202ENST00000553733 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
CLMN-202ENST00000553733 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
CLMN-202ENST00000553733 LMOD1P29536 600 aaPredicted RBP23.45■■□□□ 1.34
CLMN-202ENST00000553733 GPRC5DQ9NZD1 345 aa23.45■■□□□ 1.34
CLMN-202ENST00000553733 POLLQ9UGP5 575 aa23.45■■□□□ 1.34
CLMN-202ENST00000553733 CLEC11AQ9Y240 323 aa23.45■■□□□ 1.34
CLMN-202ENST00000553733 CNTNAP1P78357 1384 aa23.44■■□□□ 1.34
CLMN-202ENST00000553733 CWF19L2Q2TBE0 894 aaKnown RBP23.44■■□□□ 1.34
CLMN-202ENST00000553733 GPR101Q96P66 508 aaPredicted RBP23.44■■□□□ 1.34
CLMN-202ENST00000553733 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
CLMN-202ENST00000553733 MKRN1Q9UHC7 482 aaKnown RBP23.44■■□□□ 1.34
CLMN-202ENST00000553733 PDE8AO60658 829 aa23.43■■□□□ 1.34
CLMN-202ENST00000553733 RAD17O75943 681 aa23.43■■□□□ 1.34
CLMN-202ENST00000553733 CNTROBQ8N137 903 aa23.43■■□□□ 1.34
CLMN-202ENST00000553733 CCDC85AQ96PX6 553 aaPredicted RBP23.43■■□□□ 1.34
CLMN-202ENST00000553733 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
CLMN-202ENST00000553733 GMPSP49915 693 aaPredicted RBP23.42■■□□□ 1.34
CLMN-202ENST00000553733 RPS8P62241 208 aaKnown RBP23.42■■□□□ 1.34
CLMN-202ENST00000553733 CIAPIN1Q6FI81 312 aa23.42■■□□□ 1.34
CLMN-202ENST00000553733 CHMP4AQ9BY43 222 aa23.42■■□□□ 1.34
CLMN-202ENST00000553733 RTL9Q8NET4 1388 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 SHTN1A0MZ66 631 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 NEURL1BA8MQ27 555 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 FMR1Q06787 632 aaKnown RBP eCLIP23.41■■□□□ 1.34
CLMN-202ENST00000553733 FLIIQ13045 1269 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 WDR63Q8IWG1 891 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 DBNDD1Q9H9R9 158 aa23.41■■□□□ 1.34
CLMN-202ENST00000553733 TMEM88BA6NKF7 163 aa23.4■■□□□ 1.34
CLMN-202ENST00000553733 VAMP4O75379 141 aa23.4■■□□□ 1.34
CLMN-202ENST00000553733 CCDC152Q4G0S7 254 aa23.4■■□□□ 1.34
CLMN-202ENST00000553733 USP50Q70EL3 339 aaPredicted RBP23.4■■□□□ 1.34
CLMN-202ENST00000553733 TBC1D16Q8TBP0 767 aa23.4■■□□□ 1.34
CLMN-202ENST00000553733 CTSWP56202 376 aa23.39■■□□□ 1.33
CLMN-202ENST00000553733 EXOSC9Q06265 439 aaKnown RBP23.39■■□□□ 1.33
CLMN-202ENST00000553733 WASHC4Q2M389 1173 aa23.39■■□□□ 1.33
CLMN-202ENST00000553733 IFFO2Q5TF58 517 aa23.39■■□□□ 1.33
CLMN-202ENST00000553733 FAM9BQ8IZU0 186 aa23.39■■□□□ 1.33
CLMN-202ENST00000553733 ADARB2Q9NS39 739 aaKnown RBP23.39■■□□□ 1.33
CLMN-202ENST00000553733 PODXL2Q9NZ53 605 aa23.39■■□□□ 1.33
CLMN-202ENST00000553733 RIMBP2O15034 1052 aa23.38■■□□□ 1.33
CLMN-202ENST00000553733 HSPA1AP0DMV8 641 aaKnown RBP23.38■■□□□ 1.33
CLMN-202ENST00000553733 HSPA1BP0DMV9 641 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms