RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ZNF444Q8N0Y2 327 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 RBM8AQ9Y5S9 174 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 MPHOSPH10O00566 681 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 CRACR2AQ9BSW2 395 aa17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 CLTCL1P53675 1640 aa17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 TSPYL6Q8N831 410 aa17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
ARHGEF40-202ENST00000553709 ANKIB1Q9P2G1 1089 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 SPHKAPQ2M3C7 1700 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 PPP1R12BO60237 982 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 TSG101Q99816 390 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 RAB34Q9BZG1 259 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 NEFHP12036 1026 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 CEP85Q6P2H3 762 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 USP48Q86UV5 1035 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
ARHGEF40-202ENST00000553709 ERICH4A6NGS2 130 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 CBX1P83916 185 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 GRM8O00222 908 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 CPLX3Q8WVH0 158 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 KSR2Q6VAB6 950 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 CACNA2D4Q7Z3S7 1137 aa17.71■□□□□ 0.43
ARHGEF40-202ENST00000553709 CCDC102BQ68D86 513 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 MFSD6Q6ZSS7 791 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 YEATS4O95619 227 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 JAKMIP3Q5VZ66 844 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 TCEANC2Q96MN5 208 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 TMEM266Q2M3C6 531 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 INSRP06213 1382 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 MSH6P52701 1360 aa17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 FGFR1OPO95684 399 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-202ENST00000553709 ZFYP08048 801 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 LTKP29376 864 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 MAP9Q49MG5 647 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 EXOC5O00471 708 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 F13A1P00488 732 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 SEPT7Q16181 437 aaKnown RBP17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 KANK3Q6NY19 840 aa17.69■□□□□ 0.42
ARHGEF40-202ENST00000553709 UQCRFS1P1P0C7P4 283 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 TAX1BP1Q86VP1 789 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 CDC5LQ99459 802 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 PANK2Q9BZ23 570 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 CLCN1P35523 988 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 PLEKHM2Q8IWE5 1019 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 SNW1Q13573 536 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 PHACTR3Q96KR7 559 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 SYNMO15061 1565 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 INO80Q9ULG1 1556 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 MCM3P25205 808 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
ARHGEF40-202ENST00000553709 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 SEC24BO95487 1268 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 KIF5BP33176 963 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 FLT4P35916 1363 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 MAP3K4Q9Y6R4 1608 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 GOLGA6L7A0A1B0GV03 622 aa17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 USO1O60763 962 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 PYM1Q9BRP8 204 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-202ENST00000553709 DYNC1I1O14576 645 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 ISM2Q6H9L7 571 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 SYKP43405 635 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 CCDC96Q2M329 555 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 ANO6Q4KMQ2 910 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 VPS36Q86VN1 386 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 KIF20AO95235 890 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 ENOX2Q16206 610 aaKnown RBP17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 KCNG4Q8TDN1 519 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 E9PCH4 1651 aa17.66■□□□□ 0.42
ARHGEF40-202ENST00000553709 RBM25P49756 843 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 DNM1Q05193 864 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms