RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ZNF496Q96IT1 587 aaPredicted RBP8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 ATP6V1DQ9Y5K8 247 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 RFX5P48382 616 aaPredicted RBP8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 BLOC1S2Q6QNY1 142 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 NFATC2IPQ8NCF5 419 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 DDX17Q92841 729 aaKnown RBP8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 SEC62Q99442 399 aaKnown RBP8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 SLC52A2Q9HAB3 445 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 PKD1L3Q7Z443 1732 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 C1orf167Q5SNV9 1468 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 ZBTB22O15209 634 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 JAK2O60674 1132 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 KDM4AO75164 1064 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 TAF5LO75529 589 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 TFCP2Q12800 502 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 LARP1BQ659C4 914 aaKnown RBP8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 KRT28Q7Z3Y7 464 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 FAM13BQ9NYF5 915 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 USP16Q9Y5T5 823 aa8.26□□□□□ -1.09
LINC-ROR-201ENST00000553704 NUP188Q5SRE5 1749 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 HIP1O00291 1037 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 PHKG2P15735 406 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 PTPN12Q05209 780 aaKnown RBP8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 SASS6Q6UVJ0 657 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 KCNF1Q9H3M0 494 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 LETM1O95202 739 aaPredicted RBP8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 CAMK4Q16566 473 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 TNNI3KQ59H18 835 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 UBE3BQ7Z3V4 1068 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 PIBF1Q8WXW3 757 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 NLRP2Q9NX02 1062 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 FPGT-TNNI3KV9GXZ4 949 aa8.25□□□□□ -1.09
LINC-ROR-201ENST00000553704 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 PTCD1O75127 700 aaKnown RBP8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 KRT85P78386 507 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 TSC1Q92574 1164 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 LRRC2Q9BYS8 371 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 PSMA5P28066 241 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 STOX1Q6ZVD7 989 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 DDX46Q7L014 1031 aaKnown RBP8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 RAPGEF4Q8WZA2 1011 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 DNAJC2Q99543 621 aaKnown RBP8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 PDCL3Q9H2J4 239 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 PYCARDQ9ULZ3 195 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 HDAC5Q9UQL6 1122 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 MRVI1Q9Y6F6 885 aa8.24□□□□□ -1.09
LINC-ROR-201ENST00000553704 A0A0G2JLW4 131 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 CYP27B1O15528 508 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 ATP5JP18859 108 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 NOLC1Q14978 699 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 USPL1Q5W0Q7 1092 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 CKAP2LQ8IYA6 745 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 SPC24Q8NBT2 197 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 DDX11Q96FC9 970 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 ARID3AQ99856 593 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 PARP4Q9UKK3 1724 aaKnown RBP8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 MST1RQ04912 1400 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 ELP1O95163 1332 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 CYP21A2P08686 494 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 CASP7P55210 303 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 TYRO3Q06418 890 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 RABL6Q3YEC7 729 aaPredicted RBP8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 ANKRD13DQ6ZTN6 518 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 LUZP1Q86V48 1076 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 PGBD1Q96JS3 809 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 NUP62CLQ9H1M0 184 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 DACT1Q9NYF0 836 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 STRCP1A6NGW2 1772 aa8.23□□□□□ -1.09
LINC-ROR-201ENST00000553704 FOSBP53539 338 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 RESTQ13127 1097 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 Q6ZUG5 572 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 LEO1Q8WVC0 666 aaPredicted RBP8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 BRF1Q92994 677 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 ALDH8A1Q9H2A2 487 aaPredicted RBP8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 HMG20BQ9P0W2 317 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 UBR2Q8IWV8 1755 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 ABCC6O95255 1503 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 FAM177BA6PVY3 158 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 DYNC1I1O14576 645 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 CCDC192P0DO97 292 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 MAP3K11Q16584 847 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 DNTTIP2Q5QJE6 756 aaKnown RBP8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms