RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 AIMP1Q12904 312 aaKnown RBP20.55■□□□□ 0.88
ACTN1-209ENST00000553659 TCIRG1Q13488 830 aa20.55■□□□□ 0.88
ACTN1-209ENST00000553659 NLRP10Q86W26 655 aa20.55■□□□□ 0.88
ACTN1-209ENST00000553659 SP8Q8IXZ3 490 aa20.55■□□□□ 0.88
ACTN1-209ENST00000553659 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
ACTN1-209ENST00000553659 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
ACTN1-209ENST00000553659 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
ACTN1-209ENST00000553659 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
ACTN1-209ENST00000553659 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
ACTN1-209ENST00000553659 ZNRF3Q9ULT6 936 aa20.54■□□□□ 0.88
ACTN1-209ENST00000553659 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
ACTN1-209ENST00000553659 CXCL9Q07325 125 aa20.53■□□□□ 0.88
ACTN1-209ENST00000553659 MPNDQ8N594 471 aa20.53■□□□□ 0.88
ACTN1-209ENST00000553659 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
ACTN1-209ENST00000553659 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
ACTN1-209ENST00000553659 CHL1O00533 1208 aa20.52■□□□□ 0.88
ACTN1-209ENST00000553659 LBX1P52954 281 aa20.52■□□□□ 0.88
ACTN1-209ENST00000553659 MAP2K1Q02750 393 aaPredicted RBP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 FMR1Q06787 632 aaKnown RBP eCLIP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 DPP8Q6V1X1 898 aaPredicted RBP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 ADARB2Q9NS39 739 aaKnown RBP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 TRMT112Q9UI30 125 aaKnown RBP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
ACTN1-209ENST00000553659 SH3TC1Q8TE82 1336 aa20.52■□□□□ 0.87
ACTN1-209ENST00000553659 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
ACTN1-209ENST00000553659 CST9Q5W186 159 aa20.51■□□□□ 0.87
ACTN1-209ENST00000553659 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
ACTN1-209ENST00000553659 GRAPQ13588 217 aa20.5■□□□□ 0.87
ACTN1-209ENST00000553659 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
ACTN1-209ENST00000553659 E9PSI1 815 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 TRAF5O00463 557 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 APAF1O14727 1248 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 ECE1P42892 770 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 KRT24Q2M2I5 525 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 CIAPIN1Q6FI81 312 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 CCDC146Q8IYE0 955 aa20.49■□□□□ 0.87
ACTN1-209ENST00000553659 DDX60Q8IY21 1712 aaKnown RBP20.49■□□□□ 0.87
ACTN1-209ENST00000553659 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
ACTN1-209ENST00000553659 GMPSP49915 693 aaPredicted RBP20.48■□□□□ 0.87
ACTN1-209ENST00000553659 TNIP1Q15025 636 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 TMC4Q7Z404 712 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 CAPNS2Q96L46 248 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 TRIM35Q9UPQ4 493 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
ACTN1-209ENST00000553659 THSD7BQ9C0I4 1608 aa20.48■□□□□ 0.87
ACTN1-209ENST00000553659 RRP1P56182 461 aaKnown RBP20.47■□□□□ 0.87
ACTN1-209ENST00000553659 PLBD2Q8NHP8 589 aa20.47■□□□□ 0.87
ACTN1-209ENST00000553659 PGAP2Q9UHJ9 254 aa20.47■□□□□ 0.87
ACTN1-209ENST00000553659 TLL2Q9Y6L7 1015 aa20.47■□□□□ 0.87
ACTN1-209ENST00000553659 CDHR2Q9BYE9 1310 aa20.47■□□□□ 0.87
ACTN1-209ENST00000553659 LRRC37AA6NMS7 1700 aa20.47■□□□□ 0.87
ACTN1-209ENST00000553659 HOXB7P09629 217 aa20.46■□□□□ 0.87
ACTN1-209ENST00000553659 CYP4F22Q6NT55 531 aa20.46■□□□□ 0.87
ACTN1-209ENST00000553659 ANKRD13DQ6ZTN6 518 aa20.46■□□□□ 0.87
ACTN1-209ENST00000553659 PAXIP1Q6ZW49 1069 aaPredicted RBP20.46■□□□□ 0.87
ACTN1-209ENST00000553659 BCL2L13Q9BXK5 485 aa20.46■□□□□ 0.87
ACTN1-209ENST00000553659 RAD17O75943 681 aa20.45■□□□□ 0.86
ACTN1-209ENST00000553659 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
ACTN1-209ENST00000553659 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
ACTN1-209ENST00000553659 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
ACTN1-209ENST00000553659 CDCA7LQ96GN5 454 aa20.45■□□□□ 0.86
ACTN1-209ENST00000553659 GPR101Q96P66 508 aaPredicted RBP20.45■□□□□ 0.86
ACTN1-209ENST00000553659 DBF4Q9UBU7 674 aaPredicted RBP20.45■□□□□ 0.86
ACTN1-209ENST00000553659 DUSP27Q5VZP5 1158 aa20.44■□□□□ 0.86
ACTN1-209ENST00000553659 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
ACTN1-209ENST00000553659 ISCA1Q9BUE6 129 aa20.44■□□□□ 0.86
ACTN1-209ENST00000553659 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
ACTN1-209ENST00000553659 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 YDJCA8MPS7 323 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 HIRAP54198 1017 aaPredicted RBP20.43■□□□□ 0.86
ACTN1-209ENST00000553659 GRM1Q13255 1194 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
ACTN1-209ENST00000553659 WDR63Q8IWG1 891 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 BEGAINQ9BUH8 593 aa20.43■□□□□ 0.86
ACTN1-209ENST00000553659 CNOT7Q9UIV1 285 aaKnown RBP20.43■□□□□ 0.86
ACTN1-209ENST00000553659 CELF2O95319 508 aaKnown RBP20.42■□□□□ 0.86
ACTN1-209ENST00000553659 MAP2K2P36507 400 aa20.42■□□□□ 0.86
ACTN1-209ENST00000553659 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
ACTN1-209ENST00000553659 SAPCD2Q86UD0 394 aa20.42■□□□□ 0.86
ACTN1-209ENST00000553659 CFAP44Q96MT7 982 aa20.42■□□□□ 0.86
ACTN1-209ENST00000553659 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
ACTN1-209ENST00000553659 HYPKQ9NX55 129 aa20.42■□□□□ 0.86
ACTN1-209ENST00000553659 ATP5J2-PTCD1G3V325 749 aa20.41■□□□□ 0.86
ACTN1-209ENST00000553659 H7C1D1 291 aa20.41■□□□□ 0.86
ACTN1-209ENST00000553659 WASHC4Q2M389 1173 aa20.41■□□□□ 0.86
ACTN1-209ENST00000553659 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
ACTN1-209ENST00000553659 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.41■□□□□ 0.86
ACTN1-209ENST00000553659 CELF1Q92879 486 aaKnown RBP20.41■□□□□ 0.86
ACTN1-209ENST00000553659 NSFL1CQ9UNZ2 370 aaKnown RBP20.41■□□□□ 0.86
ACTN1-209ENST00000553659 TRIM28Q13263 835 aaKnown RBP20.4■□□□□ 0.86
ACTN1-209ENST00000553659 TRPM4Q8TD43 1214 aa20.4■□□□□ 0.86
ACTN1-209ENST00000553659 HHIPL1Q96JK4 782 aa20.4■□□□□ 0.86
ACTN1-209ENST00000553659 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
ACTN1-209ENST00000553659 DPF2Q92785 391 aa20.39■□□□□ 0.85
ACTN1-209ENST00000553659 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms