RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
CHD8-204ENST00000553622 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
CHD8-204ENST00000553622 PRR5LQ6MZQ0 368 aa12.15□□□□□ -0.46
CHD8-204ENST00000553622 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
CHD8-204ENST00000553622 HDAC1Q13547 482 aaPredicted RBP12.14□□□□□ -0.47
CHD8-204ENST00000553622 CCDC57Q2TAC2 916 aa12.14□□□□□ -0.47
CHD8-204ENST00000553622 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
CHD8-204ENST00000553622 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
CHD8-204ENST00000553622 ANKRD18BA2A2Z9 1011 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 SURF6O75683 361 aaKnown RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 POLD1P28340 1107 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 CENPQQ7L2Z9 268 aaPredicted RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 TTLL11Q8NHH1 800 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 KLHDC4Q8TBB5 520 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 SSH3Q8TE77 659 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 SIL1Q9H173 461 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 GREM2Q9H772 168 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
CHD8-204ENST00000553622 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
CHD8-204ENST00000553622 ITGA6P23229 1130 aa12.12□□□□□ -0.47
CHD8-204ENST00000553622 MTX1Q13505 466 aa12.12□□□□□ -0.47
CHD8-204ENST00000553622 POLA2Q14181 598 aa12.12□□□□□ -0.47
CHD8-204ENST00000553622 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
CHD8-204ENST00000553622 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
CHD8-204ENST00000553622 ZNF594Q96JF6 807 aaPredicted RBP12.12□□□□□ -0.47
CHD8-204ENST00000553622 CSF1RP07333 972 aa12.11□□□□□ -0.47
CHD8-204ENST00000553622 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD8-204ENST00000553622 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
CHD8-204ENST00000553622 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
CHD8-204ENST00000553622 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
CHD8-204ENST00000553622 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
CHD8-204ENST00000553622 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
CHD8-204ENST00000553622 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
CHD8-204ENST00000553622 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
CHD8-204ENST00000553622 DCTPP1Q9H773 170 aa12.1□□□□□ -0.47
CHD8-204ENST00000553622 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
CHD8-204ENST00000553622 PDE6BP35913 854 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 IGHMBP2P38935 993 aaKnown RBP12.09□□□□□ -0.47
CHD8-204ENST00000553622 RFX5P48382 616 aaPredicted RBP12.09□□□□□ -0.47
CHD8-204ENST00000553622 SF3B3Q15393 1217 aaKnown RBP12.09□□□□□ -0.47
CHD8-204ENST00000553622 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 CDC5LQ99459 802 aaKnown RBP12.09□□□□□ -0.47
CHD8-204ENST00000553622 MPHOSPH8Q99549 860 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 CNNM1Q9NRU3 951 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
CHD8-204ENST00000553622 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
CHD8-204ENST00000553622 COL4A1P02462 1669 aa12.08□□□□□ -0.48
CHD8-204ENST00000553622 SMARCA5O60264 1052 aaPredicted RBP12.08□□□□□ -0.48
CHD8-204ENST00000553622 PTPN12Q05209 780 aaKnown RBP12.08□□□□□ -0.48
CHD8-204ENST00000553622 C2CD5Q86YS7 1000 aa12.08□□□□□ -0.48
CHD8-204ENST00000553622 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
CHD8-204ENST00000553622 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
CHD8-204ENST00000553622 RBM17Q96I25 401 aaKnown RBP12.08□□□□□ -0.48
CHD8-204ENST00000553622 COPRSQ9NQ92 184 aa12.08□□□□□ -0.48
CHD8-204ENST00000553622 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
CHD8-204ENST00000553622 RTL9Q8NET4 1388 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 SOCS7O14512 581 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 LRRC24Q50LG9 513 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 ERC1Q8IUD2 1116 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.482e-6■■□□□ 12
CHD8-204ENST00000553622 PUS3Q9BZE2 481 aaKnown RBP12.07□□□□□ -0.48
CHD8-204ENST00000553622 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 LNPKQ9C0E8 428 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
CHD8-204ENST00000553622 AK9Q5TCS8 1911 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 C10orf71Q711Q0 1435 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 H0YIN7 160 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 EYA2O00167 538 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 METTL24Q5JXM2 366 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
CHD8-204ENST00000553622 KIF1BPQ96EK5 621 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
CHD8-204ENST00000553622 LRP5O75197 1615 aa12.06□□□□□ -0.48
CHD8-204ENST00000553622 CIAO1O76071 339 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 NPR1P16066 1061 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 CHRNA5P30532 468 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
CHD8-204ENST00000553622 RGS3P49796 1198 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 RPS8P62241 208 aaKnown RBP12.05□□□□□ -0.48
CHD8-204ENST00000553622 NUCB1Q02818 461 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 TFCP2Q12800 502 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 GRAPQ13588 217 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 CHD1LQ86WJ1 897 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
CHD8-204ENST00000553622 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
CHD8-204ENST00000553622 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms