RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 RASA1P20936 1047 aa8.47□□□□□ -1.05
FCF1-203ENST00000553615 NOP2P46087 812 aaKnown RBP8.47□□□□□ -1.05
FCF1-203ENST00000553615 MAP2K1Q02750 393 aaPredicted RBP8.47□□□□□ -1.05
FCF1-203ENST00000553615 LARP1Q6PKG0 1096 aaKnown RBP8.47□□□□□ -1.05
FCF1-203ENST00000553615 OGFOD1Q8N543 542 aa8.47□□□□□ -1.05
FCF1-203ENST00000553615 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
FCF1-203ENST00000553615 TACO1Q9BSH4 297 aaKnown RBP8.47□□□□□ -1.05
FCF1-203ENST00000553615 MED4Q9NPJ6 270 aa8.47□□□□□ -1.05
FCF1-203ENST00000553615 RAB6BQ9NRW1 208 aa8.47□□□□□ -1.05
FCF1-203ENST00000553615 DNAAF2Q9NVR5 837 aaKnown RBP8.47□□□□□ -1.05
FCF1-203ENST00000553615 GAPVD1Q14C86 1478 aa8.46□□□□□ -1.05
FCF1-203ENST00000553615 GDF10P55107 478 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 LARGE2Q8N3Y3 721 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.06
FCF1-203ENST00000553615 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 ETNK1Q9HBU6 452 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 CWC15Q9P013 229 aaKnown RBP8.46□□□□□ -1.06
FCF1-203ENST00000553615 NAIPQ13075 1403 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.06
FCF1-203ENST00000553615 PCF11O94913 1555 aaKnown RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 SAMD9Q5K651 1589 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 DHX16O60231 1041 aaKnown RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 MAN1A2O60476 641 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 CLDN10P78369 228 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 ZKSCAN8Q15776 578 aaPredicted RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 NOM1Q5C9Z4 860 aaKnown RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 NBPF10Q6P3W6 841 aaKnown RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 CCDC91Q7Z6B0 441 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 TXLNBQ8N3L3 684 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 CTNNA3Q9UI47 895 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 SOS2Q07890 1332 aaPredicted RBP8.45□□□□□ -1.06
FCF1-203ENST00000553615 MBD5Q9P267 1494 aa8.45□□□□□ -1.06
FCF1-203ENST00000553615 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
FCF1-203ENST00000553615 IL2RAP01589 272 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 INHAP05111 366 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 U2AF2P26368 475 aaKnown RBP eCLIP8.44□□□□□ -1.067e-7■□□□□ 8.5
FCF1-203ENST00000553615 CASQ1P31415 396 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 GPC1P35052 558 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 RNF144AP50876 292 aaPredicted RBP8.44□□□□□ -1.06
FCF1-203ENST00000553615 UVSSAQ2YD98 709 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 ZNF787Q6DD87 383 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 FAM184AQ8NB25 1140 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 XAGE2Q96GT9 111 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
FCF1-203ENST00000553615 PSMD1Q99460 953 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 RSPH14Q9UHP6 348 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 KANK1Q14678 1352 aa8.44□□□□□ -1.06
FCF1-203ENST00000553615 LOC102724159A0A0B4J2E5 919 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 FAM196BA6NMK8 535 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 POTECB2RU33 542 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 GOLIM4O00461 696 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 BACH1O14867 736 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
FCF1-203ENST00000553615 CYP2C19P33261 490 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 SCNN1DP51172 638 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 RAD51AP2Q09MP3 1159 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 NOLC1Q14978 699 aaKnown RBP eCLIP8.43□□□□□ -1.06
FCF1-203ENST00000553615 PWP2Q15269 919 aaKnown RBP8.43□□□□□ -1.06
FCF1-203ENST00000553615 RABEP1Q15276 862 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 SLC27A3Q5K4L6 730 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 NBPF5PQ86XG9 351 aaPredicted RBP8.43□□□□□ -1.06
FCF1-203ENST00000553615 CERS3Q8IU89 383 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 DDX49Q9Y6V7 483 aaKnown RBP8.43□□□□□ -1.06
FCF1-203ENST00000553615 ATAD2Q6PL18 1390 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 PARD3Q8TEW0 1356 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 EFCAB5A4FU69 1503 aa8.43□□□□□ -1.06
FCF1-203ENST00000553615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 FIGNL2A6NMB9 653 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 TMEM229AB2RXF0 380 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 STAU1O95793 577 aaKnown RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 ZNF853P0CG23 659 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 SNRPBP14678 240 aaKnown RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 CENPCQ03188 943 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.42□□□□□ -1.06
FCF1-203ENST00000553615 CDCA8Q53HL2 280 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 CT47A1Q5JQC4 288 aaPredicted RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 FOXD4L5Q5VV16 416 aaPredicted RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 CAVIN1Q6NZI2 390 aaKnown RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 SIX5Q8N196 739 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 PMFBP1Q8TBY8 1022 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 RNF217Q8TC41 542 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 PBXIP1Q96AQ6 731 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
FCF1-203ENST00000553615 FAM53CQ9NYF3 392 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 KIAA1024Q9UPX6 916 aa8.42□□□□□ -1.06
FCF1-203ENST00000553615 USP17L15C9J2P7 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L10C9JJH3 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L13C9JLJ4 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L12C9JPN9 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L11C9JVI0 530 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms