RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 GPBP1L1Q9HC44 474 aaPredicted RBP6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 ECHDC1Q9NTX5 307 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 HYPKQ9NX55 129 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 HMG20BQ9P0W2 317 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 SMC3Q9UQE7 1217 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 MED23Q9ULK4 1368 aa6.28□□□□□ -1.4
TMEM55B-204ENST00000553602 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 SRGAP3O43295 1099 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 KDM4AO75164 1064 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 GIGYF1O75420 1035 aaPredicted RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 PTMAP06454 111 aaKnown RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 ZKSCAN1P17029 563 aaPredicted RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 PSMA5P28066 241 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 XPCQ01831 940 aaPredicted RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 MAP2K5Q13163 448 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 NECTIN1Q15223 517 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 AKAP4Q5JQC9 854 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 TSHZ3Q63HK5 1081 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 TMEM92Q6UXU6 159 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 RBM43Q6ZSC3 357 aaKnown RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 CLASRPQ8N2M8 674 aaKnown RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 KCNH5Q8NCM2 988 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 KDM4CQ9H3R0 1056 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 DIAPH3Q9NSV4 1193 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 MIS18AQ9NYP9 233 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 DBF4Q9UBU7 674 aaPredicted RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 MTMR6Q9Y217 621 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 R3HCC1Q9Y3T6 440 aaKnown RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 CYP46A1Q9Y6A2 500 aa6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 PARP4Q9UKK3 1724 aaKnown RBP6.27□□□□□ -1.41
TMEM55B-204ENST00000553602 KIF1AQ12756 1690 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 NPHP3Q7Z494 1330 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 NPHP4O75161 1426 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 TRPM3Q9HCF6 1732 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 GADD45BO75293 160 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 CCDC192P0DO97 292 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 OSBPP22059 807 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 KRT85P78386 507 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 SYCP1Q15431 976 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 RNF20Q5VTR2 975 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 SMAP1Q8IYB5 467 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 LINS1Q8NG48 757 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 DDX19AQ9NUU7 478 aaKnown RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 COLQQ9Y215 455 aaPredicted RBP6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 CNPY2Q9Y2B0 182 aa6.26□□□□□ -1.41
TMEM55B-204ENST00000553602 SPEF2Q9C093 1822 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 GNPATO15228 680 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 EVI5O60447 810 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 ADCY5O95622 1261 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 C7P10643 843 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 CASTP20810 708 aaKnown RBP6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 MLECQ14165 292 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 HIC1Q14526 733 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 KRT32Q14532 448 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 NOLC1Q14978 699 aaKnown RBP eCLIP6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 USPL1Q5W0Q7 1092 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 KSR2Q6VAB6 950 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 C3orf67Q6ZVT6 689 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 NUTM1Q86Y26 1132 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 KIAA1524Q8TCG1 905 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 FAM200AQ8TCP9 573 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 DDX12PQ92771 950 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 MAP4K1Q92918 833 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 IL1RAPL2Q9NP60 686 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 PDRG1Q9NUG6 133 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 CHPF2Q9P2E5 772 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 TMEM94Q12767 1356 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 PXDNQ92626 1479 aa6.25□□□□□ -1.41
TMEM55B-204ENST00000553602 LAMB4A4D0S4 1761 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 PI4KAP2A4QPH2 592 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 DDX58O95786 925 aaKnown RBP6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 GJB2P29033 226 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 CDC25BP30305 580 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 ST3GAL1Q11201 340 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 PLEKHO1Q53GL0 409 aaPredicted RBP6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 ATL3Q6DD88 541 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 PI4KAP1Q8N8J0 262 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 RGS22Q8NE09 1264 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 CCDC102AQ96A19 550 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 CHMP4CQ96CF2 233 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 CHAMP1Q96JM3 812 aa6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 JAKMIP1Q96N16 626 aaKnown RBP6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 CCDC94Q9BW85 323 aaPredicted RBP6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 PHAXQ9H814 394 aaKnown RBP6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 RBM8AQ9Y5S9 174 aaKnown RBP6.24□□□□□ -1.41
TMEM55B-204ENST00000553602 SCN11AQ9UI33 1791 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 GRM8O00222 908 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 IRF6O14896 467 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 RNMTO43148 476 aaKnown RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 FIBPO43427 364 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 LARGE1O95461 756 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 IFIT2P09913 472 aaKnown RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 TEFQ10587 303 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms