RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
APEX1-205ENST00000553555 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
APEX1-205ENST00000553555 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
APEX1-205ENST00000553555 ERFEQ4G0M1 354 aa16.99■□□□□ 0.31
APEX1-205ENST00000553555 TPTE2Q6XPS3 522 aa16.99■□□□□ 0.31
APEX1-205ENST00000553555 SIL1Q9H173 461 aa16.99■□□□□ 0.31
APEX1-205ENST00000553555 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
APEX1-205ENST00000553555 SASH1O94885 1247 aa16.98■□□□□ 0.31
APEX1-205ENST00000553555 TM4SF1P30408 202 aa16.98■□□□□ 0.31
APEX1-205ENST00000553555 SLC15A2Q16348 729 aa16.98■□□□□ 0.31
APEX1-205ENST00000553555 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
APEX1-205ENST00000553555 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
APEX1-205ENST00000553555 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
APEX1-205ENST00000553555 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
APEX1-205ENST00000553555 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
APEX1-205ENST00000553555 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
APEX1-205ENST00000553555 CCDC85AQ96PX6 553 aaPredicted RBP16.97■□□□□ 0.31
APEX1-205ENST00000553555 GREM2Q9H772 168 aa16.97■□□□□ 0.31
APEX1-205ENST00000553555 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
APEX1-205ENST00000553555 IL1RAPL2Q9NP60 686 aa16.97■□□□□ 0.31
APEX1-205ENST00000553555 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
APEX1-205ENST00000553555 MSH5O43196 834 aa16.96■□□□□ 0.31
APEX1-205ENST00000553555 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
APEX1-205ENST00000553555 ZNF594Q96JF6 807 aaPredicted RBP16.96■□□□□ 0.31
APEX1-205ENST00000553555 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
APEX1-205ENST00000553555 ANKRD18BA2A2Z9 1011 aa16.96■□□□□ 0.3
APEX1-205ENST00000553555 ITGA6P23229 1130 aa16.96■□□□□ 0.3
APEX1-205ENST00000553555 EYA2O00167 538 aa16.95■□□□□ 0.3
APEX1-205ENST00000553555 ATG9AQ7Z3C6 839 aa16.95■□□□□ 0.3
APEX1-205ENST00000553555 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
APEX1-205ENST00000553555 FBXO3Q9UK99 471 aa16.95■□□□□ 0.3
APEX1-205ENST00000553555 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
APEX1-205ENST00000553555 CIAO1O76071 339 aa16.94■□□□□ 0.3
APEX1-205ENST00000553555 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
APEX1-205ENST00000553555 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
APEX1-205ENST00000553555 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
APEX1-205ENST00000553555 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
APEX1-205ENST00000553555 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
APEX1-205ENST00000553555 TAF1P21675 1872 aa16.93■□□□□ 0.3
APEX1-205ENST00000553555 SERPINB2P05120 415 aa16.93■□□□□ 0.3
APEX1-205ENST00000553555 IL15P40933 162 aaPredicted RBP16.93■□□□□ 0.3
APEX1-205ENST00000553555 LRRC24Q50LG9 513 aa16.93■□□□□ 0.3
APEX1-205ENST00000553555 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
APEX1-205ENST00000553555 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
APEX1-205ENST00000553555 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
APEX1-205ENST00000553555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
APEX1-205ENST00000553555 PDE1AP54750 535 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 TFCP2Q12800 502 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 C3orf67Q6ZVT6 689 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 POLRMTO00411 1230 aaKnown RBP16.92■□□□□ 0.3
APEX1-205ENST00000553555 DDR1Q08345 913 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
APEX1-205ENST00000553555 NPHP1O15259 732 aa16.91■□□□□ 0.3
APEX1-205ENST00000553555 MX1P20591 662 aa16.91■□□□□ 0.3
APEX1-205ENST00000553555 CCDC24Q8N4L8 307 aa16.91■□□□□ 0.3
APEX1-205ENST00000553555 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
APEX1-205ENST00000553555 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
APEX1-205ENST00000553555 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
APEX1-205ENST00000553555 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
APEX1-205ENST00000553555 RIPOR2Q9Y4F9 1068 aa16.9■□□□□ 0.3
APEX1-205ENST00000553555 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
APEX1-205ENST00000553555 BMP2KLQ5H9B9 411 aa16.89■□□□□ 0.29
APEX1-205ENST00000553555 TTC22Q5TAA0 569 aa16.89■□□□□ 0.29
APEX1-205ENST00000553555 AACSQ86V21 672 aa16.89■□□□□ 0.29
APEX1-205ENST00000553555 GPR108Q9NPR9 543 aa16.89■□□□□ 0.29
APEX1-205ENST00000553555 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
APEX1-205ENST00000553555 RIC1Q4ADV7 1423 aa16.89■□□□□ 0.29
APEX1-205ENST00000553555 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
APEX1-205ENST00000553555 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 CNNM1Q9NRU3 951 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 AOX1Q06278 1338 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 LRP5O75197 1615 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 ST5P78524 1137 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 UPF1Q92900 1129 aaKnown RBP eCLIP16.88■□□□□ 0.29
APEX1-205ENST00000553555 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
APEX1-205ENST00000553555 CCDC8Q9H0W5 538 aaPredicted RBP16.88■□□□□ 0.29
APEX1-205ENST00000553555 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
APEX1-205ENST00000553555 GSPT1P15170 499 aaKnown RBP16.87■□□□□ 0.29
APEX1-205ENST00000553555 IGHMBP2P38935 993 aaKnown RBP16.87■□□□□ 0.29
APEX1-205ENST00000553555 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
APEX1-205ENST00000553555 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
APEX1-205ENST00000553555 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
APEX1-205ENST00000553555 COL4A1P02462 1669 aa16.87■□□□□ 0.29
APEX1-205ENST00000553555 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
APEX1-205ENST00000553555 MMP10P09238 476 aa16.86■□□□□ 0.29
APEX1-205ENST00000553555 TSHZ3Q63HK5 1081 aa16.86■□□□□ 0.29
APEX1-205ENST00000553555 MSL1Q68DK7 614 aa16.86■□□□□ 0.29
APEX1-205ENST00000553555 MPHOSPH8Q99549 860 aa16.86■□□□□ 0.29
APEX1-205ENST00000553555 PARP3Q9Y6F1 533 aa16.86■□□□□ 0.29
APEX1-205ENST00000553555 METTL24Q5JXM2 366 aa16.85■□□□□ 0.29
APEX1-205ENST00000553555 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
APEX1-205ENST00000553555 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
APEX1-205ENST00000553555 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
APEX1-205ENST00000553555 TLR7Q9NYK1 1049 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms