RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 RNF225M0QZC1 329 aaPredicted RBP12.56□□□□□ -0.4
PCNX1-205ENST00000553508 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
PCNX1-205ENST00000553508 EIF1AXP47813 144 aaKnown RBP12.56□□□□□ -0.4
PCNX1-205ENST00000553508 SERPINB4P48594 390 aa12.56□□□□□ -0.4
PCNX1-205ENST00000553508 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
PCNX1-205ENST00000553508 DNM1Q05193 864 aaKnown RBP12.56□□□□□ -0.4
PCNX1-205ENST00000553508 EGFRP00533 1210 aa12.55□□□□□ -0.4
PCNX1-205ENST00000553508 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCNX1-205ENST00000553508 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
PCNX1-205ENST00000553508 EDEM1Q92611 657 aa12.55□□□□□ -0.4
PCNX1-205ENST00000553508 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
PCNX1-205ENST00000553508 C11orf16Q9NQ32 467 aa12.55□□□□□ -0.4
PCNX1-205ENST00000553508 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
PCNX1-205ENST00000553508 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
PCNX1-205ENST00000553508 STARD13Q9Y3M8 1113 aa12.54□□□□□ -0.4
PCNX1-205ENST00000553508 DGKGP49619 791 aa12.53□□□□□ -0.4
PCNX1-205ENST00000553508 KCNMA1Q12791 1236 aa12.53□□□□□ -0.4
PCNX1-205ENST00000553508 C8orf86Q6ZUL3 223 aa12.53□□□□□ -0.4
PCNX1-205ENST00000553508 M0R082 166 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 MMP20O60882 483 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 MAP3K6O95382 1288 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 ALBP02768 609 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 HFE2Q6ZVN8 426 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 ZNF417Q8TAU3 575 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 NUDT8Q8WV74 236 aa12.52□□□□□ -0.41
PCNX1-205ENST00000553508 ZNF587Q96SQ5 575 aaPredicted RBP12.52□□□□□ -0.41
PCNX1-205ENST00000553508 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
PCNX1-205ENST00000553508 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
PCNX1-205ENST00000553508 FAM13AO94988 1023 aa12.51□□□□□ -0.41
PCNX1-205ENST00000553508 CPB1P15086 417 aa12.51□□□□□ -0.41
PCNX1-205ENST00000553508 RASSF7Q02833 373 aa12.51□□□□□ -0.41
PCNX1-205ENST00000553508 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
PCNX1-205ENST00000553508 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
PCNX1-205ENST00000553508 ALKBH2Q6NS38 261 aa12.5□□□□□ -0.41
PCNX1-205ENST00000553508 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
PCNX1-205ENST00000553508 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
PCNX1-205ENST00000553508 H3BRB1 525 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 PSAPP07602 524 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 GSK3AP49840 483 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 C8orf34Q49A92 452 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 PSAPL1Q6NUJ1 521 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 SUV39H2Q9H5I1 410 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 TUT1Q9H6E5 874 aaKnown RBP12.49□□□□□ -0.41
PCNX1-205ENST00000553508 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 POLIQ9UNA4 740 aa12.49□□□□□ -0.41
PCNX1-205ENST00000553508 A6NHS1 94 aa12.48□□□□□ -0.41
PCNX1-205ENST00000553508 GDF11O95390 407 aa12.48□□□□□ -0.41
PCNX1-205ENST00000553508 PDGFAP04085 211 aa12.48□□□□□ -0.41
PCNX1-205ENST00000553508 PCSK2P16519 638 aa12.48□□□□□ -0.41
PCNX1-205ENST00000553508 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
PCNX1-205ENST00000553508 GNB5O14775 395 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 ICMTO60725 284 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 NPR3P17342 541 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 PCSK7Q16549 785 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 TXNDC2Q86VQ3 553 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
PCNX1-205ENST00000553508 GGNBP2Q9H3C7 697 aa12.47□□□□□ -0.41
PCNX1-205ENST00000553508 JPH1Q9HDC5 661 aaPredicted RBP12.47□□□□□ -0.41
PCNX1-205ENST00000553508 J3QW42 95 aa12.46□□□□□ -0.41
PCNX1-205ENST00000553508 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
PCNX1-205ENST00000553508 PLAURQ03405 335 aa12.46□□□□□ -0.41
PCNX1-205ENST00000553508 TTC39BQ5VTQ0 682 aaPredicted RBP12.46□□□□□ -0.41
PCNX1-205ENST00000553508 ZNF438Q7Z4V0 828 aa12.46□□□□□ -0.41
PCNX1-205ENST00000553508 TMEM151AQ8N4L1 468 aa12.46□□□□□ -0.41
PCNX1-205ENST00000553508 TRPM4Q8TD43 1214 aa12.46□□□□□ -0.41
PCNX1-205ENST00000553508 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
PCNX1-205ENST00000553508 NRLP54845 237 aa12.45□□□□□ -0.42
PCNX1-205ENST00000553508 GPLD1P80108 840 aa12.45□□□□□ -0.42
PCNX1-205ENST00000553508 C20orf204Q6ZNR8 217 aa12.45□□□□□ -0.42
PCNX1-205ENST00000553508 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
PCNX1-205ENST00000553508 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
PCNX1-205ENST00000553508 PIK3R2O00459 728 aa12.44□□□□□ -0.42
PCNX1-205ENST00000553508 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
PCNX1-205ENST00000553508 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
PCNX1-205ENST00000553508 PERM1Q5SV97 790 aa12.44□□□□□ -0.42
PCNX1-205ENST00000553508 TRIM11Q96F44 468 aa12.44□□□□□ -0.42
PCNX1-205ENST00000553508 PLVAPQ9BX97 442 aa12.44□□□□□ -0.42
PCNX1-205ENST00000553508 ELP3Q9H9T3 547 aa12.44□□□□□ -0.42
PCNX1-205ENST00000553508 TMEM63CQ9P1W3 806 aa12.44□□□□□ -0.42
PCNX1-205ENST00000553508 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
PCNX1-205ENST00000553508 FZD6O60353 706 aa12.43□□□□□ -0.42
PCNX1-205ENST00000553508 LILRB5O75023 590 aa12.43□□□□□ -0.42
PCNX1-205ENST00000553508 BRD1O95696 1058 aa12.43□□□□□ -0.42
PCNX1-205ENST00000553508 SIK1P57059 783 aa12.43□□□□□ -0.42
PCNX1-205ENST00000553508 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
PCNX1-205ENST00000553508 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
PCNX1-205ENST00000553508 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
PCNX1-205ENST00000553508 COL8A1P27658 744 aa12.42□□□□□ -0.42
PCNX1-205ENST00000553508 OR13H1Q8NG92 308 aa12.42□□□□□ -0.42
PCNX1-205ENST00000553508 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
PCNX1-205ENST00000553508 PDE12Q6L8Q7 609 aaKnown RBP12.41□□□□□ -0.42
PCNX1-205ENST00000553508 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
PCNX1-205ENST00000553508 SMG9Q9H0W8 520 aaKnown RBP12.41□□□□□ -0.42
PCNX1-205ENST00000553508 GHRHP01286 108 aa12.4□□□□□ -0.42
PCNX1-205ENST00000553508 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
PCNX1-205ENST00000553508 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms