RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 PTPRCP08575 1304 aa10.54□□□□□ -0.72
PCNX1-204ENST00000553428 KIF3CO14782 793 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 ALDH1L1O75891 902 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 C1QTNF8P60827 252 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 RPS8P62241 208 aaKnown RBP10.53□□□□□ -0.72
PCNX1-204ENST00000553428 BEND3Q5T5X7 828 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 CDCA7LQ96GN5 454 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 ZNF277Q9NRM2 450 aaPredicted RBP10.53□□□□□ -0.72
PCNX1-204ENST00000553428 FER1L6Q2WGJ9 1857 aa10.53□□□□□ -0.72
PCNX1-204ENST00000553428 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
PCNX1-204ENST00000553428 CTSWP56202 376 aa10.52□□□□□ -0.73
PCNX1-204ENST00000553428 DPP8Q6V1X1 898 aaPredicted RBP10.52□□□□□ -0.73
PCNX1-204ENST00000553428 UBE3BQ7Z3V4 1068 aa10.52□□□□□ -0.73
PCNX1-204ENST00000553428 MPNDQ8N594 471 aa10.52□□□□□ -0.73
PCNX1-204ENST00000553428 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
PCNX1-204ENST00000553428 JDP2Q8WYK2 163 aa10.52□□□□□ -0.73
PCNX1-204ENST00000553428 CACNA1FO60840 1977 aa10.52□□□□□ -0.73
PCNX1-204ENST00000553428 RTL9Q8NET4 1388 aa10.52□□□□□ -0.73
PCNX1-204ENST00000553428 F6X3S4 739 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 FZD9O00144 591 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 TOMM70O94826 608 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 CASP7P55210 303 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 SSH1Q8WYL5 1049 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 CELF1Q92879 486 aaKnown RBP10.51□□□□□ -0.73
PCNX1-204ENST00000553428 CDC5LQ99459 802 aaKnown RBP10.51□□□□□ -0.73
PCNX1-204ENST00000553428 SRCIN1Q9C0H9 1055 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 NMRK2Q9NPI5 230 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 SBF1O95248 1867 aa10.51□□□□□ -0.73
PCNX1-204ENST00000553428 VEGFAP15692 232 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-204ENST00000553428 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
PCNX1-204ENST00000553428 ANKRD18AQ8IVF6 992 aa10.5□□□□□ -0.73
PCNX1-204ENST00000553428 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-204ENST00000553428 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
PCNX1-204ENST00000553428 TTLL11Q8NHH1 800 aa10.5□□□□□ -0.73
PCNX1-204ENST00000553428 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-204ENST00000553428 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
PCNX1-204ENST00000553428 LAMB2P55268 1798 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 GRM8O00222 908 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 PPIP5K2O43314 1243 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 CSF1RP07333 972 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 EIF6P56537 245 aaKnown RBP10.49□□□□□ -0.73
PCNX1-204ENST00000553428 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 NIM1KQ8IY84 436 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
PCNX1-204ENST00000553428 JARID2Q92833 1246 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-204ENST00000553428 RRAGCQ9HB90 399 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 SMC4Q9NTJ3 1288 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
PCNX1-204ENST00000553428 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
PCNX1-204ENST00000553428 GPC2Q8N158 579 aa10.48□□□□□ -0.73
PCNX1-204ENST00000553428 EYA3Q99504 573 aa10.48□□□□□ -0.73
PCNX1-204ENST00000553428 SEC31BQ9NQW1 1179 aa10.48□□□□□ -0.73
PCNX1-204ENST00000553428 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
PCNX1-204ENST00000553428 C9orf78Q9NZ63 289 aaPredicted RBP10.48□□□□□ -0.73
PCNX1-204ENST00000553428 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
PCNX1-204ENST00000553428 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-204ENST00000553428 IGHMBP2P38935 993 aaKnown RBP10.47□□□□□ -0.73
PCNX1-204ENST00000553428 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
PCNX1-204ENST00000553428 GPSM2P81274 684 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 FSTL1Q12841 308 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 AOC3Q16853 763 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 ARHGAP45Q92619 1136 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 BCL2L13Q9BXK5 485 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 API5Q9BZZ5 524 aaKnown RBP10.47□□□□□ -0.73
PCNX1-204ENST00000553428 GREM2Q9H772 168 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 ZNRF3Q9ULT6 936 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 UTYO14607 1347 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 ZBED9Q6R2W3 1325 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 KIF16BQ96L93 1317 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
PCNX1-204ENST00000553428 DICER1Q9UPY3 1922 aaKnown RBP10.46□□□□□ -0.73
PCNX1-204ENST00000553428 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.73
PCNX1-204ENST00000553428 ITGA6P23229 1130 aa10.46□□□□□ -0.73
PCNX1-204ENST00000553428 CCDC85AQ96PX6 553 aaPredicted RBP10.46□□□□□ -0.73
PCNX1-204ENST00000553428 ANKIB1Q9P2G1 1089 aa10.46□□□□□ -0.73
PCNX1-204ENST00000553428 GGA1Q9UJY5 639 aa10.46□□□□□ -0.73
PCNX1-204ENST00000553428 XDHP47989 1333 aa10.46□□□□□ -0.73
PCNX1-204ENST00000553428 ZNF541Q9H0D2 1346 aa10.46□□□□□ -0.73
PCNX1-204ENST00000553428 LRRC37AA6NMS7 1700 aa10.46□□□□□ -0.74
PCNX1-204ENST00000553428 WDR90Q96KV7 1748 aa10.46□□□□□ -0.74
PCNX1-204ENST00000553428 POTECB2RU33 542 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 ATP2B4P23634 1241 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 CCT4P50991 539 aaKnown RBP10.45□□□□□ -0.74
PCNX1-204ENST00000553428 FOXO4P98177 505 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 IFIT5Q13325 482 aaKnown RBP10.45□□□□□ -0.74
PCNX1-204ENST00000553428 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 SMC1BQ8NDV3 1235 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 TBC1D16Q8TBP0 767 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 MPHOSPH8Q99549 860 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 ZC3H12CQ9C0D7 883 aaKnown RBP10.45□□□□□ -0.74
PCNX1-204ENST00000553428 POLLQ9UGP5 575 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
PCNX1-204ENST00000553428 IPO8O15397 1037 aaKnown RBP10.44□□□□□ -0.74
PCNX1-204ENST00000553428 UFL1O94874 794 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms