RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 MYH3P11055 1940 aa13.06□□□□□ -0.32
LINC00517-201ENST00000553396 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
LINC00517-201ENST00000553396 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
LINC00517-201ENST00000553396 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
LINC00517-201ENST00000553396 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
LINC00517-201ENST00000553396 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
LINC00517-201ENST00000553396 CC2D2BQ6DHV5 1058 aa13.05□□□□□ -0.32
LINC00517-201ENST00000553396 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 E9PSI1 815 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
LINC00517-201ENST00000553396 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
LINC00517-201ENST00000553396 GRAPQ13588 217 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
LINC00517-201ENST00000553396 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
LINC00517-201ENST00000553396 RRAGCQ9HB90 399 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 LRRC37AA6NMS7 1700 aa13.04□□□□□ -0.32
LINC00517-201ENST00000553396 COL4A5P29400 1685 aa13.03□□□□□ -0.32
LINC00517-201ENST00000553396 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
LINC00517-201ENST00000553396 F6X3S4 739 aa13.03□□□□□ -0.32
LINC00517-201ENST00000553396 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
LINC00517-201ENST00000553396 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
LINC00517-201ENST00000553396 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
LINC00517-201ENST00000553396 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
LINC00517-201ENST00000553396 PSMD1Q99460 953 aa13.03□□□□□ -0.32
LINC00517-201ENST00000553396 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
LINC00517-201ENST00000553396 WDR90Q96KV7 1748 aa13.02□□□□□ -0.32
LINC00517-201ENST00000553396 BBOX1O75936 387 aa13.02□□□□□ -0.33
LINC00517-201ENST00000553396 SLFN5Q08AF3 891 aa13.02□□□□□ -0.33
LINC00517-201ENST00000553396 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.33
LINC00517-201ENST00000553396 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
LINC00517-201ENST00000553396 PDE8AO60658 829 aa13.01□□□□□ -0.33
LINC00517-201ENST00000553396 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
LINC00517-201ENST00000553396 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
LINC00517-201ENST00000553396 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
LINC00517-201ENST00000553396 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
LINC00517-201ENST00000553396 SEC31BQ9NQW1 1179 aa13.01□□□□□ -0.33
LINC00517-201ENST00000553396 CDHR2Q9BYE9 1310 aa13.01□□□□□ -0.33
LINC00517-201ENST00000553396 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
LINC00517-201ENST00000553396 PPIP5K2O43314 1243 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 TOMM70O94826 608 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 GCKRQ14397 625 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 GRIPAP1Q4V328 841 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
LINC00517-201ENST00000553396 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 MPNDQ8N594 471 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 LINS1Q8NG48 757 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 JDP2Q8WYK2 163 aa13□□□□□ -0.33
LINC00517-201ENST00000553396 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
LINC00517-201ENST00000553396 CTSWP56202 376 aa12.99□□□□□ -0.33
LINC00517-201ENST00000553396 AOC3Q16853 763 aa12.99□□□□□ -0.33
LINC00517-201ENST00000553396 SLC4A10Q6U841 1118 aa12.99□□□□□ -0.33
LINC00517-201ENST00000553396 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
LINC00517-201ENST00000553396 BCL2L13Q9BXK5 485 aa12.99□□□□□ -0.33
LINC00517-201ENST00000553396 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
LINC00517-201ENST00000553396 SCN4AP35499 1836 aa12.98□□□□□ -0.33
LINC00517-201ENST00000553396 H7C1W4 665 aa12.98□□□□□ -0.33
LINC00517-201ENST00000553396 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
LINC00517-201ENST00000553396 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
LINC00517-201ENST00000553396 NSFL1CQ9UNZ2 370 aaKnown RBP12.98□□□□□ -0.33
LINC00517-201ENST00000553396 POTECB2RU33 542 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 FZD9O00144 591 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
LINC00517-201ENST00000553396 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
LINC00517-201ENST00000553396 RTFDC1Q9BY42 306 aaPredicted RBP12.97□□□□□ -0.33
LINC00517-201ENST00000553396 GREM2Q9H772 168 aa12.97□□□□□ -0.33
LINC00517-201ENST00000553396 CASP7P55210 303 aa12.96□□□□□ -0.33
LINC00517-201ENST00000553396 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
LINC00517-201ENST00000553396 GPSM2P81274 684 aa12.96□□□□□ -0.33
LINC00517-201ENST00000553396 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.33
LINC00517-201ENST00000553396 TRMT2AQ8IZ69 625 aaKnown RBP12.96□□□□□ -0.33
LINC00517-201ENST00000553396 GJA3Q9Y6H8 435 aa12.96□□□□□ -0.33
LINC00517-201ENST00000553396 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
LINC00517-201ENST00000553396 HSPA6P17066 643 aa12.95□□□□□ -0.34
LINC00517-201ENST00000553396 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00517-201ENST00000553396 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
LINC00517-201ENST00000553396 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
LINC00517-201ENST00000553396 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
LINC00517-201ENST00000553396 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
LINC00517-201ENST00000553396 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
LINC00517-201ENST00000553396 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
LINC00517-201ENST00000553396 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
LINC00517-201ENST00000553396 GPC2Q8N158 579 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
LINC00517-201ENST00000553396 PTPRCP08575 1304 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 IQCA1LA6NCM1 817 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 GRM8O00222 908 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms