RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 LNPKQ9C0E8 428 aa8.53□□□□□ -1.04
TMTC1-209ENST00000553189 PSMA5P28066 241 aa8.53□□□□□ -1.04
TMTC1-209ENST00000553189 NCBP1Q09161 790 aaKnown RBP8.53□□□□□ -1.04
TMTC1-209ENST00000553189 SREBF2Q12772 1141 aa8.53□□□□□ -1.04
TMTC1-209ENST00000553189 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
TMTC1-209ENST00000553189 ANKRD36BQ8N2N9 1353 aa8.53□□□□□ -1.04
TMTC1-209ENST00000553189 ZEB2O60315 1214 aa8.52□□□□□ -1.04
TMTC1-209ENST00000553189 KINO60870 393 aaKnown RBP8.52□□□□□ -1.04
TMTC1-209ENST00000553189 CT47A1Q5JQC4 288 aaPredicted RBP8.52□□□□□ -1.04
TMTC1-209ENST00000553189 TBC1D22AQ8WUA7 517 aa8.52□□□□□ -1.04
TMTC1-209ENST00000553189 CDK5RAP3Q96JB5 506 aa8.52□□□□□ -1.04
TMTC1-209ENST00000553189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.52□□□□□ -1.04
TMTC1-209ENST00000553189 TTF1Q15361 905 aaPredicted RBP8.52□□□□□ -1.05
TMTC1-209ENST00000553189 FILIP1LQ4L180 1135 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 KCNH4Q9UQ05 1017 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 GOLGA6L10A6NI86 522 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
TMTC1-209ENST00000553189 ATP2B4P23634 1241 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 TNS4Q8IZW8 715 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 ATP5J2-PTCD1G3V325 749 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 MATR3P43243 847 aaKnown RBP eCLIP8.52□□□□□ -1.05
TMTC1-209ENST00000553189 PICALMQ13492 652 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 INCENPQ9NQS7 918 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 CCDC192P0DO97 292 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 PDIA4P13667 645 aaKnown RBP8.52□□□□□ -1.05
TMTC1-209ENST00000553189 PDCP20941 246 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
TMTC1-209ENST00000553189 GADL1Q6ZQY3 521 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 CTNNA3Q9UI47 895 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 OFD1O75665 1012 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 LDHBP07195 334 aaKnown RBP8.51□□□□□ -1.05
TMTC1-209ENST00000553189 PIP4K2AP48426 406 aaPredicted RBP8.51□□□□□ -1.05
TMTC1-209ENST00000553189 SPOUT1Q5T280 376 aaKnown RBP8.51□□□□□ -1.05
TMTC1-209ENST00000553189 CERS3Q8IU89 383 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 COA7Q96BR5 231 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 LRRCC1Q9C099 1032 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 SBNO1A3KN83 1393 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 TNS3Q68CZ2 1445 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 CNTROBQ8N137 903 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 NKTRP30414 1462 aaKnown RBP8.51□□□□□ -1.05
TMTC1-209ENST00000553189 GLI2P10070 1586 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 ERLIN2O94905 339 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 KRT18P05783 430 aaKnown RBP8.51□□□□□ -1.05
TMTC1-209ENST00000553189 TTC6Q86TZ1 520 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 DNAAF4Q8WXU2 420 aa8.51□□□□□ -1.05
TMTC1-209ENST00000553189 PDE4BQ07343 736 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 CCDC129Q6ZRS4 1044 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 ZSCAN30Q86W11 494 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 TCOF1Q13428 1488 aaKnown RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 ARHGEF12Q9NZN5 1544 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 RNMTO43148 476 aaKnown RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 CCDC178Q5BJE1 867 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 TTLL5Q6EMB2 1281 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 RAET1EQ8TD07 263 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 BLMP54132 1417 aaPredicted RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 ODF2Q5BJF6 829 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 PTCH1Q13635 1447 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 BBOX1O75936 387 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 ZNF157P51786 506 aaPredicted RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 NBPF15Q8N660 670 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 XAGE3Q8WTP9 111 aa8.5□□□□□ -1.05
TMTC1-209ENST00000553189 ZNF396Q96N95 335 aaPredicted RBP8.5□□□□□ -1.05
TMTC1-209ENST00000553189 M0QZ92 97 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 BACH2Q9BYV9 841 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 CCDC69A6NI79 296 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 EPS15P42566 896 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 FOSBP53539 338 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 GIMAP7Q8NHV1 300 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 DPF3Q92784 378 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 NCOA3Q9Y6Q9 1424 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 RPS6KA4O75676 772 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 LMNB1P20700 586 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 TAF12Q16514 161 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 COPS6Q7L5N1 327 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 MAP3K1Q13233 1512 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 C21orf2O43822 256 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 PPP2R1AP30153 589 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 RNF41Q9H4P4 317 aaPredicted RBP8.49□□□□□ -1.05
TMTC1-209ENST00000553189 TXLNBQ8N3L3 684 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.05
TMTC1-209ENST00000553189 MIS18AQ9NYP9 233 aa8.49□□□□□ -1.05
TMTC1-209ENST00000553189 COL17A1Q9UMD9 1497 aaPredicted RBP8.48□□□□□ -1.05
TMTC1-209ENST00000553189 PANK1Q8TE04 598 aa8.48□□□□□ -1.05
TMTC1-209ENST00000553189 PPP2R3CQ969Q6 453 aa8.48□□□□□ -1.05
TMTC1-209ENST00000553189 CALCOCO1Q9P1Z2 691 aa8.48□□□□□ -1.05
TMTC1-209ENST00000553189 MAP3K19Q56UN5 1328 aa8.48□□□□□ -1.05
TMTC1-209ENST00000553189 ERICH4A6NGS2 130 aa8.48□□□□□ -1.05
TMTC1-209ENST00000553189 MINDY4BA8MYZ0 360 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms