RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 NSFL1CQ9UNZ2 370 aaKnown RBP12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 BEND3Q5T5X7 828 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 DZIP1Q86YF9 867 aaKnown RBP12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 SLC26A6Q9BXS9 759 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 FAM170AA1A519 330 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 GNPATO15228 680 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 ORC3Q9UBD5 711 aaPredicted RBP12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 A2ML1A8K2U0 1454 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 RFC4P35249 363 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 EPHA10Q5JZY3 1008 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 SNX14Q9Y5W7 946 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 METTL22Q9BUU2 404 aaPredicted RBP12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 TRMT1Q9NXH9 659 aaKnown RBP12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 CYP7A1P22680 504 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 ADORA1P30542 326 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 TNNI3KQ59H18 835 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 TMEM67Q5HYA8 995 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 C17orf53Q8N3J3 647 aaPredicted RBP12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 AKAP2Q9Y2D5 859 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 FPGT-TNNI3KV9GXZ4 949 aa12.66□□□□□ -0.38
TGFBR1-209ENST00000552516 PICALMQ13492 652 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 IQGAP3Q86VI3 1631 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 SYT1P21579 422 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 ZAP70P43403 619 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 MAP3K12Q12852 859 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 MKNK2Q9HBH9 465 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
TGFBR1-209ENST00000552516 ANKRD1Q15327 319 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 CCDC192P0DO97 292 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 MCMDC2Q4G0Z9 681 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 AK7Q96M32 723 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 ABCA6Q8N139 1617 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 MAP3K4Q9Y6R4 1608 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 CYP27B1O15528 508 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 SLC5A1P13866 664 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 SLC4A4Q9Y6R1 1079 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 SERPINC1P01008 464 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 TRIM22Q8IYM9 498 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 CPLX3Q8WVH0 158 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 ARMT1Q9H993 441 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 DACT1Q9NYF0 836 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
TGFBR1-209ENST00000552516 B4E1Z4 1266 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 XAGE2Q96GT9 111 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 PLIN2Q99541 437 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 ZSCAN22P10073 491 aaPredicted RBP12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
TGFBR1-209ENST00000552516 MYOM2P54296 1465 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 CTNNA3Q9UI47 895 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 RAB3GAP1Q15042 981 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 PHKBQ93100 1093 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 GLI2P10070 1586 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
TGFBR1-209ENST00000552516 SGSM2O43147 1006 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 ENOX2Q16206 610 aaKnown RBP12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 SEC31BQ9NQW1 1179 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 SAP30BPQ9UHR5 308 aaKnown RBP12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 TULP4Q9NRJ4 1543 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 SLC27A2O14975 620 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 PRC1O43663 620 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 KRT32Q14532 448 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 NLRP1Q9C000 1473 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 ERBB3P21860 1342 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 MBD4O95243 580 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 GREM2Q9H772 168 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 TET3O43151 1660 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 ERCC3P19447 782 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 ZNF396Q96N95 335 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms