RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 NRKQ7Z2Y5 1582 aa11.02□□□□□ -0.65
BEST3-211ENST00000552295 MSH6P52701 1360 aa11.02□□□□□ -0.65
BEST3-211ENST00000552295 MST1RQ04912 1400 aa11.01□□□□□ -0.65
BEST3-211ENST00000552295 ADAMTS2O95450 1211 aa11.01□□□□□ -0.65
BEST3-211ENST00000552295 RNF144AP50876 292 aaPredicted RBP11.01□□□□□ -0.65
BEST3-211ENST00000552295 MARSP56192 900 aaKnown RBP11.01□□□□□ -0.65
BEST3-211ENST00000552295 PRICKLE2Q7Z3G6 844 aa11.01□□□□□ -0.65
BEST3-211ENST00000552295 PCDHB9Q9Y5E1 797 aa11.01□□□□□ -0.65
BEST3-211ENST00000552295 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
BEST3-211ENST00000552295 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
BEST3-211ENST00000552295 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
BEST3-211ENST00000552295 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
BEST3-211ENST00000552295 ZBBXA8MT70 800 aa11□□□□□ -0.65
BEST3-211ENST00000552295 SUZ12Q15022 739 aaKnown RBP11□□□□□ -0.65
BEST3-211ENST00000552295 GOPCQ9HD26 462 aa11□□□□□ -0.65
BEST3-211ENST00000552295 CUEDC1Q9NWM3 386 aaPredicted RBP11□□□□□ -0.65
BEST3-211ENST00000552295 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
BEST3-211ENST00000552295 ANKRD26Q9UPS8 1709 aa11□□□□□ -0.65
BEST3-211ENST00000552295 LOC100996750A0A140TA64 210 aa10.99□□□□□ -0.65
BEST3-211ENST00000552295 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
BEST3-211ENST00000552295 RHOQP17081 205 aa10.99□□□□□ -0.65
BEST3-211ENST00000552295 SRSF11Q05519 484 aaKnown RBP10.99□□□□□ -0.65
BEST3-211ENST00000552295 KRTAP4-6Q9BYQ5 205 aa10.99□□□□□ -0.65
BEST3-211ENST00000552295 POLR3AO14802 1390 aaPredicted RBP10.99□□□□□ -0.65
BEST3-211ENST00000552295 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
BEST3-211ENST00000552295 ATF3P18847 181 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 IRS1P35568 1242 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
BEST3-211ENST00000552295 CCDC125Q86Z20 511 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 KNSTRNQ9Y448 316 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 ACEP12821 1306 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 NPC1L1Q9UHC9 1359 aa10.98□□□□□ -0.65
BEST3-211ENST00000552295 MEN1O00255 615 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
BEST3-211ENST00000552295 GPC1P35052 558 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 GAS6Q14393 721 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 PMFBP1Q8TBY8 1022 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 KTN1Q86UP2 1357 aaKnown RBP10.97□□□□□ -0.65
BEST3-211ENST00000552295 USP6P35125 1406 aa10.97□□□□□ -0.65
BEST3-211ENST00000552295 EDC4Q6P2E9 1401 aaKnown RBP10.97□□□□□ -0.65
BEST3-211ENST00000552295 SSH2Q76I76 1423 aa10.96□□□□□ -0.65
BEST3-211ENST00000552295 ANP32CO43423 234 aa10.96□□□□□ -0.65
BEST3-211ENST00000552295 FBXO45P0C2W1 286 aa10.96□□□□□ -0.65
BEST3-211ENST00000552295 SCARF2Q96GP6 870 aaPredicted RBP10.96□□□□□ -0.65
BEST3-211ENST00000552295 ORAI2Q96SN7 254 aa10.96□□□□□ -0.65
BEST3-211ENST00000552295 TRPM3Q9HCF6 1732 aaPredicted RBP10.95□□□□□ -0.66
BEST3-211ENST00000552295 PARD3Q8TEW0 1356 aa10.95□□□□□ -0.66
BEST3-211ENST00000552295 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
BEST3-211ENST00000552295 KANK3Q6NY19 840 aa10.95□□□□□ -0.66
BEST3-211ENST00000552295 TRIM22Q8IYM9 498 aa10.95□□□□□ -0.66
BEST3-211ENST00000552295 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
BEST3-211ENST00000552295 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
BEST3-211ENST00000552295 NSD2O96028 1365 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 RNF20Q5VTR2 975 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 FOXR1Q6PIV2 292 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
BEST3-211ENST00000552295 DNMT3AQ9Y6K1 912 aaPredicted RBP10.94□□□□□ -0.66
BEST3-211ENST00000552295 MARF1Q9Y4F3 1742 aaKnown RBP10.94□□□□□ -0.66
BEST3-211ENST00000552295 PIK3C2AO00443 1686 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 USP54Q70EL1 1684 aa10.94□□□□□ -0.66
BEST3-211ENST00000552295 A0A1W2PRU2 124 aa10.93□□□□□ -0.66
BEST3-211ENST00000552295 CELA2BP08218 269 aaPredicted RBP10.93□□□□□ -0.66
BEST3-211ENST00000552295 ERVK-9P63128 1117 aa10.93□□□□□ -0.66
BEST3-211ENST00000552295 CC2D1BQ5T0F9 858 aaKnown RBP10.93□□□□□ -0.66
BEST3-211ENST00000552295 RIPOR1Q6ZS17 1223 aa10.93□□□□□ -0.66
BEST3-211ENST00000552295 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
BEST3-211ENST00000552295 ENAMQ9NRM1 1142 aa10.93□□□□□ -0.66
BEST3-211ENST00000552295 SLAIN2Q9P270 581 aa10.93□□□□□ -0.66
BEST3-211ENST00000552295 IQSEC2Q5JU85 1478 aa10.93□□□□□ -0.66
BEST3-211ENST00000552295 BRD4O60885 1362 aaPredicted RBP10.92□□□□□ -0.66
BEST3-211ENST00000552295 NHSL1Q5SYE7 1610 aa10.92□□□□□ -0.66
BEST3-211ENST00000552295 TTC21BQ7Z4L5 1316 aa10.92□□□□□ -0.66
BEST3-211ENST00000552295 FYB1O15117 783 aa10.92□□□□□ -0.66
BEST3-211ENST00000552295 MCCD1P59942 119 aaPredicted RBP10.92□□□□□ -0.66
BEST3-211ENST00000552295 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
BEST3-211ENST00000552295 NLRP3Q96P20 1036 aa10.92□□□□□ -0.66
BEST3-211ENST00000552295 MBIPQ9NS73 344 aa10.92□□□□□ -0.66
BEST3-211ENST00000552295 TTC21AQ8NDW8 1320 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 RALBP1Q15311 655 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 SLC27A3Q5K4L6 730 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 BRINP3Q76B58 766 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.91□□□□□ -0.66
BEST3-211ENST00000552295 ZNF592Q92610 1267 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 DYRK1BQ9Y463 629 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 ROBO1Q9Y6N7 1651 aa10.91□□□□□ -0.66
BEST3-211ENST00000552295 PXDNQ92626 1479 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 H7C1W4 665 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 GPR25O00155 361 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 FOXO3O43524 673 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 GPAT2Q6NUI2 795 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 CYP2U1Q7Z449 544 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 NME9Q86XW9 330 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 GGNBP2Q9H3C7 697 aa10.9□□□□□ -0.66
BEST3-211ENST00000552295 MYBBP1AQ9BQG0 1328 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms