RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 COL4A1P02462 1669 aa29.82■■■□□ 2.36
TROAP-216ENST00000551567 TSPYL6Q8N831 410 aa29.82■■■□□ 2.36
TROAP-216ENST00000551567 SUPT20HQ8NEM7 779 aa29.82■■■□□ 2.36
TROAP-216ENST00000551567 RTFDC1Q9BY42 306 aaPredicted RBP29.82■■■□□ 2.36
TROAP-216ENST00000551567 PCNTO95613 3336 aa29.81■■■□□ 2.36
TROAP-216ENST00000551567 TRIM28Q13263 835 aaKnown RBP29.81■■■□□ 2.36
TROAP-216ENST00000551567 CCDC30Q5VVM6 783 aa29.81■■■□□ 2.36
TROAP-216ENST00000551567 MYD88Q99836 296 aa29.81■■■□□ 2.36
TROAP-216ENST00000551567 DUOX1Q9NRD9 1551 aa29.81■■■□□ 2.36
TROAP-216ENST00000551567 IRS4O14654 1257 aaPredicted RBP29.8■■■□□ 2.36
TROAP-216ENST00000551567 LMOD1P29536 600 aaPredicted RBP29.8■■■□□ 2.36
TROAP-216ENST00000551567 PNMA8AQ86V59 439 aaPredicted RBP29.8■■■□□ 2.36
TROAP-216ENST00000551567 PASKQ96RG2 1323 aa29.79■■■□□ 2.36
TROAP-216ENST00000551567 ANP32CO43423 234 aa29.79■■■□□ 2.36
TROAP-216ENST00000551567 SF3B3Q15393 1217 aaKnown RBP29.79■■■□□ 2.36
TROAP-216ENST00000551567 WWC1Q8IX03 1113 aa29.79■■■□□ 2.36
TROAP-216ENST00000551567 VPS33BQ9H267 617 aa29.79■■■□□ 2.36
TROAP-216ENST00000551567 CREBZFQ9NS37 354 aa29.79■■■□□ 2.36
TROAP-216ENST00000551567 SCNN1DP51172 638 aa29.78■■■□□ 2.36
TROAP-216ENST00000551567 CCDC27Q2M243 656 aa29.78■■■□□ 2.36
TROAP-216ENST00000551567 TMC4Q7Z404 712 aa29.78■■■□□ 2.36
TROAP-216ENST00000551567 CELF1Q92879 486 aaKnown RBP29.78■■■□□ 2.36
TROAP-216ENST00000551567 ITGBL1O95965 494 aaPredicted RBP29.76■■■□□ 2.35
TROAP-216ENST00000551567 EPS15P42566 896 aa29.76■■■□□ 2.35
TROAP-216ENST00000551567 KIAA2012Q0VF49 1180 aa29.76■■■□□ 2.35
TROAP-216ENST00000551567 MAP1SQ66K74 1059 aaPredicted RBP29.76■■■□□ 2.35
TROAP-216ENST00000551567 ZBTB38Q8NAP3 1195 aaPredicted RBP29.76■■■□□ 2.35
TROAP-216ENST00000551567 CHMP4AQ9BY43 222 aa29.76■■■□□ 2.35
TROAP-216ENST00000551567 ZNRF3Q9ULT6 936 aa29.76■■■□□ 2.35
TROAP-216ENST00000551567 DDX58O95786 925 aaKnown RBP29.75■■■□□ 2.35
TROAP-216ENST00000551567 IFFO2Q5TF58 517 aa29.75■■■□□ 2.35
TROAP-216ENST00000551567 MKRN1Q9UHC7 482 aaKnown RBP29.75■■■□□ 2.35
TROAP-216ENST00000551567 CXCL9Q07325 125 aa29.74■■■□□ 2.35
TROAP-216ENST00000551567 CCDC191Q8NCU4 936 aa29.73■■■□□ 2.35
TROAP-216ENST00000551567 METTL22Q9BUU2 404 aaPredicted RBP29.73■■■□□ 2.35
TROAP-216ENST00000551567 CNTROBQ8N137 903 aa29.72■■■□□ 2.35
TROAP-216ENST00000551567 JARID2Q92833 1246 aaPredicted RBP29.72■■■□□ 2.35
TROAP-216ENST00000551567 STK31Q9BXU1 1019 aa29.72■■■□□ 2.35
TROAP-216ENST00000551567 CWC25Q9NXE8 425 aaPredicted RBP29.72■■■□□ 2.35
TROAP-216ENST00000551567 MAP3K2Q9Y2U5 619 aa29.72■■■□□ 2.35
TROAP-216ENST00000551567 TWISTNBQ3B726 338 aaPredicted RBP29.71■■■□□ 2.35
TROAP-216ENST00000551567 NSFL1CQ9UNZ2 370 aaKnown RBP29.71■■■□□ 2.35
TROAP-216ENST00000551567 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
TROAP-216ENST00000551567 IL16Q14005 1332 aa29.71■■■□□ 2.35
TROAP-216ENST00000551567 PCCAP05165 728 aaPredicted RBP29.7■■■□□ 2.35
TROAP-216ENST00000551567 TMEM88BA6NKF7 163 aa29.69■■■□□ 2.34
TROAP-216ENST00000551567 RAD17O75943 681 aa29.69■■■□□ 2.34
TROAP-216ENST00000551567 HSP90B1P14625 803 aaKnown RBP29.69■■■□□ 2.34
TROAP-216ENST00000551567 CIAPIN1Q6FI81 312 aa29.69■■■□□ 2.34
TROAP-216ENST00000551567 SEC31BQ9NQW1 1179 aa29.69■■■□□ 2.34
TROAP-216ENST00000551567 GPRC5DQ9NZD1 345 aa29.69■■■□□ 2.34
TROAP-216ENST00000551567 PI4KAP2A4QPH2 592 aa29.68■■■□□ 2.34
TROAP-216ENST00000551567 GMPSP49915 693 aaPredicted RBP29.68■■■□□ 2.34
TROAP-216ENST00000551567 RPS8P62241 208 aaKnown RBP29.68■■■□□ 2.34
TROAP-216ENST00000551567 GPSM2P81274 684 aa29.68■■■□□ 2.34
TROAP-216ENST00000551567 KSR2Q6VAB6 950 aa29.68■■■□□ 2.34
TROAP-216ENST00000551567 PI4KAP1Q8N8J0 262 aa29.68■■■□□ 2.34
TROAP-216ENST00000551567 CNTNAP1P78357 1384 aa29.67■■■□□ 2.34
TROAP-216ENST00000551567 USP50Q70EL3 339 aaPredicted RBP29.67■■■□□ 2.34
TROAP-216ENST00000551567 CCDC85AQ96PX6 553 aaPredicted RBP29.67■■■□□ 2.34
TROAP-216ENST00000551567 FANCIQ9NVI1 1328 aa29.67■■■□□ 2.34
TROAP-216ENST00000551567 YDJCA8MPS7 323 aa29.66■■■□□ 2.34
TROAP-216ENST00000551567 C6orf229H3BNL8 230 aa29.66■■■□□ 2.34
TROAP-216ENST00000551567 HSPA1AP0DMV8 641 aaKnown RBP29.66■■■□□ 2.34
TROAP-216ENST00000551567 HSPA1BP0DMV9 641 aaKnown RBP29.66■■■□□ 2.34
TROAP-216ENST00000551567 WASHC4Q2M389 1173 aa29.66■■■□□ 2.34
TROAP-216ENST00000551567 G2E3Q7L622 706 aa29.66■■■□□ 2.34
TROAP-216ENST00000551567 MYH3P11055 1940 aa29.66■■■□□ 2.34
TROAP-216ENST00000551567 RIMBP2O15034 1052 aa29.65■■■□□ 2.34
TROAP-216ENST00000551567 PDE8AO60658 829 aa29.65■■■□□ 2.34
TROAP-216ENST00000551567 TNIP1Q15025 636 aa29.65■■■□□ 2.34
TROAP-216ENST00000551567 CCDC152Q4G0S7 254 aa29.65■■■□□ 2.34
TROAP-216ENST00000551567 NCBP3Q53F19 620 aaKnown RBP29.65■■■□□ 2.34
TROAP-216ENST00000551567 BCL2L13Q9BXK5 485 aa29.65■■■□□ 2.34
TROAP-216ENST00000551567 ADARB2Q9NS39 739 aaKnown RBP29.65■■■□□ 2.34
TROAP-216ENST00000551567 POLLQ9UGP5 575 aa29.65■■■□□ 2.34
TROAP-216ENST00000551567 SLC4A2P04920 1241 aa29.64■■■□□ 2.34
TROAP-216ENST00000551567 IGKV5-2P06315 115 aa29.64■■■□□ 2.34
TROAP-216ENST00000551567 GPR101Q96P66 508 aaPredicted RBP29.64■■■□□ 2.34
TROAP-216ENST00000551567 DBNDD1Q9H9R9 158 aa29.64■■■□□ 2.34
TROAP-216ENST00000551567 SPEF2Q9C093 1822 aa29.64■■■□□ 2.33
TROAP-216ENST00000551567 NEXNQ0ZGT2 675 aa29.63■■■□□ 2.33
TROAP-216ENST00000551567 TRPM7Q96QT4 1865 aa29.62■■■□□ 2.33
TROAP-216ENST00000551567 FMR1Q06787 632 aaKnown RBP eCLIP29.62■■■□□ 2.33
TROAP-216ENST00000551567 CWF19L2Q2TBE0 894 aaKnown RBP29.62■■■□□ 2.33
TROAP-216ENST00000551567 CDHR2Q9BYE9 1310 aa29.62■■■□□ 2.33
TROAP-216ENST00000551567 COL13A1Q5TAT6 717 aaPredicted RBP29.61■■■□□ 2.33
TROAP-216ENST00000551567 TBC1D16Q8TBP0 767 aa29.61■■■□□ 2.33
TROAP-216ENST00000551567 CACNA1FO60840 1977 aa29.61■■■□□ 2.33
TROAP-216ENST00000551567 EYA3Q99504 573 aa29.6■■■□□ 2.33
TROAP-216ENST00000551567 DOK7Q18PE1 504 aa29.59■■■□□ 2.33
TROAP-216ENST00000551567 WDR63Q8IWG1 891 aa29.59■■■□□ 2.33
TROAP-216ENST00000551567 FAM9BQ8IZU0 186 aa29.59■■■□□ 2.33
TROAP-216ENST00000551567 ANKIB1Q9P2G1 1089 aa29.59■■■□□ 2.33
TROAP-216ENST00000551567 SHTN1A0MZ66 631 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 NEURL1BA8MQ27 555 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 TRAF5O00463 557 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 PSMD14O00487 310 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 ECE2O60344 883 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 UFL1O94874 794 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms