RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 XRN1Q8IZH2 1706 aaKnown RBP14.34□□□□□ -0.11
ERBB3-219ENST00000551242 CCDC93Q567U6 631 aa14.34□□□□□ -0.11
ERBB3-219ENST00000551242 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
ERBB3-219ENST00000551242 CCAR1Q8IX12 1150 aaKnown RBP14.34□□□□□ -0.11
ERBB3-219ENST00000551242 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
ERBB3-219ENST00000551242 RESTQ13127 1097 aa14.34□□□□□ -0.11
ERBB3-219ENST00000551242 NMIQ13287 307 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-219ENST00000551242 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.11
ERBB3-219ENST00000551242 NFATC2IPQ8NCF5 419 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 MAP4K1Q92918 833 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 EPC1Q9H2F5 836 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 NUTM2FA1L443 756 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 H3BQV1 296 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 KIF2AO00139 706 aaPredicted RBP14.33□□□□□ -0.12
ERBB3-219ENST00000551242 ZRANB2O95218 330 aaKnown RBP eCLIP14.33□□□□□ -0.12
ERBB3-219ENST00000551242 PSMA5P28066 241 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 ARMCX5Q6P1M9 558 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 TMCO3Q6UWJ1 677 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 ECHDC1Q9NTX5 307 aa14.33□□□□□ -0.12
ERBB3-219ENST00000551242 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.12
ERBB3-219ENST00000551242 RPS6KB1P23443 525 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 HOMER1Q86YM7 354 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
ERBB3-219ENST00000551242 SMARCE1Q969G3 411 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 ZBTB9Q96C00 473 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
ERBB3-219ENST00000551242 TTC41PQ6P2S7 1318 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 UBXN4Q92575 508 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 DNAI1Q9UI46 699 aa14.32□□□□□ -0.12
ERBB3-219ENST00000551242 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
ERBB3-219ENST00000551242 PPFIA3O75145 1194 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 TMC6Q7Z403 805 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 ORC3Q9UBD5 711 aaPredicted RBP14.31□□□□□ -0.12
ERBB3-219ENST00000551242 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 SMC2O95347 1197 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 GSDMDP57764 484 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 TEX35Q5T0J7 233 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 KCND1Q9NSA2 647 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 DLC1Q96QB1 1528 aa14.31□□□□□ -0.12
ERBB3-219ENST00000551242 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
ERBB3-219ENST00000551242 ANKRD1Q15327 319 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 TAF7Q15545 349 aaPredicted RBP14.3□□□□□ -0.12
ERBB3-219ENST00000551242 CEP57L1Q8IYX8 460 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 FMNL2Q96PY5 1086 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 XPO4Q9C0E2 1151 aaKnown RBP14.3□□□□□ -0.12
ERBB3-219ENST00000551242 OSBPL5Q9H0X9 879 aaPredicted RBP14.3□□□□□ -0.12
ERBB3-219ENST00000551242 ANO10Q9NW15 660 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 USP42Q9H9J4 1324 aaKnown RBP14.3□□□□□ -0.12
ERBB3-219ENST00000551242 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 TRIM66O15016 1216 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 KINO60870 393 aaKnown RBP14.3□□□□□ -0.12
ERBB3-219ENST00000551242 GYS2P54840 703 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 EVI5LQ96CN4 794 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 IFNKQ9P0W0 207 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 CFAP45Q9UL16 551 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
ERBB3-219ENST00000551242 SASH3O75995 380 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 CEBPAP49715 358 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 AACSQ86V21 672 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 CCDC34Q96HJ3 373 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 TSPYL1Q9H0U9 437 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 LCMT1Q9UIC8 334 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 PRR36Q9H6K5 1346 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 FANCGO15287 622 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 SFPQP23246 707 aaKnown RBP eCLIP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 TNNT3P45378 269 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 ARGLU1Q9NWB6 273 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-219ENST00000551242 RSPH14Q9UHP6 348 aa14.29□□□□□ -0.12
ERBB3-219ENST00000551242 CTAGE5O15320 804 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 ANXA1P04083 346 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 OAS2P29728 719 aaKnown RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 TPM4P67936 248 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 C10orf67Q8IYJ2 551 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 TMX1Q9H3N1 280 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 SETD1AO15047 1707 aaKnown RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 URI1O94763 535 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 HSP90B1P14625 803 aaKnown RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 HSP90AB4PQ58FF6 505 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 TXLNBQ8N3L3 684 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 CARD6Q9BX69 1037 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 PI4KAP2A4QPH2 592 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 ETF1P62495 437 aaKnown RBP14.28□□□□□ -0.12
ERBB3-219ENST00000551242 PI4KAP1Q8N8J0 262 aa14.28□□□□□ -0.12
ERBB3-219ENST00000551242 FAM208AQ9UK61 1670 aaKnown RBP14.27□□□□□ -0.12
ERBB3-219ENST00000551242 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.12
ERBB3-219ENST00000551242 DPCR1Q3MIW9 517 aa14.27□□□□□ -0.12
ERBB3-219ENST00000551242 FSIP1Q8NA03 581 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms