RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, human

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFDN5-215	ENST00000551223	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.01	□□□□□ -0.49
PFDN5-215	ENST00000551223	PLA2G12B	Q9BX93	195 aa		12.01	□□□□□ -0.49
PFDN5-215	ENST00000551223	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.01	□□□□□ -0.49
PFDN5-215	ENST00000551223	TAF1	P21675	1872 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	PPEF1	O14829	653 aa	Predicted RBP	12	□□□□□ -0.49
PFDN5-215	ENST00000551223	IPO8	O15397	1037 aa	Known RBP	12	□□□□□ -0.49
PFDN5-215	ENST00000551223	YY1	P25490	414 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	CTSW	P56202	376 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	RASSF7	Q02833	373 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	CCDC152	Q4G0S7	254 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	CCDC93	Q567U6	631 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	TTLL11	Q8NHH1	800 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	FRAT1	Q92837	279 aa	Predicted RBP	12	□□□□□ -0.49
PFDN5-215	ENST00000551223	CELF1	Q92879	486 aa	Known RBP	12	□□□□□ -0.49
PFDN5-215	ENST00000551223	SEC31B	Q9NQW1	1179 aa		12	□□□□□ -0.49
PFDN5-215	ENST00000551223	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	CCT4	P50991	539 aa	Known RBP	11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	PRELP	P51888	382 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	CC2D2B	Q6DHV5	1058 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	ATF7IP	Q6VMQ6	1270 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	TNN	Q9UQP3	1299 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	ATP6V0A2	Q9Y487	856 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	UTY	O14607	1347 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	FER1L6	Q2WGJ9	1857 aa		11.99	□□□□□ -0.49
PFDN5-215	ENST00000551223	COL4A1	P02462	1669 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	LTBP3	Q9NS15	1303 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	CSF1R	P07333	972 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	TRIM27	P14373	513 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	RPS8	P62241	208 aa	Known RBP	11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	FOXO4	P98177	505 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	EPHA10	Q5JZY3	1008 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	C9orf131	Q5VYM1	1079 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	ZKSCAN2	Q63HK3	967 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	SP8	Q8IXZ3	490 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	RTKN2	Q8IZC4	609 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	USP44	Q9H0E7	712 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	TAOK3	Q9H2K8	898 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	GREM2	Q9H772	168 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	MYH3	P11055	1940 aa		11.98	□□□□□ -0.49
PFDN5-215	ENST00000551223	SBF1	O95248	1867 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	SNED1	Q8TER0	1413 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	RTL9	Q8NET4	1388 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	LMNB1	P20700	586 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	INTS3	Q68E01	1043 aa	Known RBP	11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	TMC4	Q7Z404	712 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	KAZALD1	Q96I82	304 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	SUCLG2	Q96I99	432 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	TMX4	Q9H1E5	349 aa	Predicted RBP	11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	RNF181	Q9P0P0	153 aa		11.97	□□□□□ -0.49
PFDN5-215	ENST00000551223	FAM161A	Q3B820	660 aa		11.96	□□□□□ -0.49
PFDN5-215	ENST00000551223	GRIPAP1	Q4V328	841 aa		11.96	□□□□□ -0.49
PFDN5-215	ENST00000551223	LMBR1L	Q6UX01	489 aa		11.96	□□□□□ -0.49
PFDN5-215	ENST00000551223	CLUAP1	Q96AJ1	413 aa		11.96	□□□□□ -0.49
PFDN5-215	ENST00000551223	PSMD1	Q99460	953 aa		11.96	□□□□□ -0.49
PFDN5-215	ENST00000551223	RCAN3	Q9UKA8	241 aa		11.96	□□□□□ -0.49
PFDN5-215	ENST00000551223	CCDC88A	Q3V6T2	1871 aa		11.95	□□□□□ -0.5
PFDN5-215	ENST00000551223	ITGA6	P23229	1130 aa		11.95	□□□□□ -0.5
PFDN5-215	ENST00000551223	ANKRD18A	Q8IVF6	992 aa		11.95	□□□□□ -0.5
PFDN5-215	ENST00000551223	MPND	Q8N594	471 aa		11.95	□□□□□ -0.5
PFDN5-215	ENST00000551223	CDC5L	Q99459	802 aa	Known RBP	11.95	□□□□□ -0.5
PFDN5-215	ENST00000551223	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.95	□□□□□ -0.5
PFDN5-215	ENST00000551223	DPP8	Q6V1X1	898 aa	Predicted RBP	11.94	□□□□□ -0.5
PFDN5-215	ENST00000551223	BICC1	Q9H694	974 aa	Known RBP	11.94	□□□□□ -0.5
PFDN5-215	ENST00000551223	CHMP3	Q9Y3E7	222 aa		11.94	□□□□□ -0.5
PFDN5-215	ENST00000551223	ANKRD18B	A2A2Z9	1011 aa		11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	UBTFL1	P0CB47	393 aa	Predicted RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	IARS	P41252	1262 aa	Known RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	GPSM2	P81274	684 aa		11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	IFIT5	Q13325	482 aa	Known RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	RABL6	Q3YEC7	729 aa	Predicted RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	DZIP1L	Q8IYY4	767 aa	Known RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	TMEM57	Q8N5G2	664 aa		11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	ANKRD44	Q8N8A2	993 aa		11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	MEIS3	Q99687	375 aa		11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	BSDC1	Q9NW68	430 aa	Predicted RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.93	□□□□□ -0.5
PFDN5-215	ENST00000551223	LRRC37A	A6NMS7	1700 aa		11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	RLBP1	P12271	317 aa		11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	IGHMBP2	P38935	993 aa	Known RBP	11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	CCDC57	Q2TAC2	916 aa		11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	FTSJ3	Q8IY81	847 aa	Known RBP	11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	SUPT20H	Q8NEM7	779 aa		11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	MINPP1	Q9UNW1	487 aa		11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	DICER1	Q9UPY3	1922 aa	Known RBP	11.92	□□□□□ -0.5
PFDN5-215	ENST00000551223	ZNF594	Q96JF6	807 aa	Predicted RBP	11.91	□□□□□ -0.5
PFDN5-215	ENST00000551223	MPHOSPH8	Q99549	860 aa		11.91	□□□□□ -0.5
PFDN5-215	ENST00000551223	PODXL2	Q9NZ53	605 aa		11.91	□□□□□ -0.5
PFDN5-215	ENST00000551223	POLL	Q9UGP5	575 aa		11.91	□□□□□ -0.5
PFDN5-215	ENST00000551223	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	C6orf229	H3BNL8	230 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	PPIP5K2	O43314	1243 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	PLIN1	O60240	522 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	GNAI3	P08754	354 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	AOC3	Q16853	763 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	LARGE2	Q8N3Y3	721 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	TBC1D16	Q8TBP0	767 aa		11.9	□□□□□ -0.5
PFDN5-215	ENST00000551223	PANK1	Q8TE04	598 aa		11.9	□□□□□ -0.5

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