RNA–Protein interactions for RNA: ENST00000551132.5

CNOT2-228, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-228ENST00000551132 UPF3BQ9BZI7 483 aaKnown RBP12.24□□□□□ -0.45
CNOT2-228ENST00000551132 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
CNOT2-228ENST00000551132 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
CNOT2-228ENST00000551132 TLR7Q9NYK1 1049 aaKnown RBP12.24□□□□□ -0.45
CNOT2-228ENST00000551132 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
CNOT2-228ENST00000551132 LIMCH1Q9UPQ0 1083 aa12.24□□□□□ -0.45
CNOT2-228ENST00000551132 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
CNOT2-228ENST00000551132 PALLDQ8WX93 1383 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 ABCC12Q96J65 1359 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 ERVV-1B6SEH8 477 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 BAG4O95429 457 aaKnown RBP12.23□□□□□ -0.45
CNOT2-228ENST00000551132 CSPP1Q1MSJ5 1256 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 VPS53Q5VIR6 699 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 BLOC1S2Q6QNY1 142 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
CNOT2-228ENST00000551132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.23□□□□□ -0.45
CNOT2-228ENST00000551132 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
CNOT2-228ENST00000551132 ATP6V1DQ9Y5K8 247 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
CNOT2-228ENST00000551132 ITGB4P16144 1822 aa12.23□□□□□ -0.45
CNOT2-228ENST00000551132 MED23Q9ULK4 1368 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-228ENST00000551132 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-228ENST00000551132 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
CNOT2-228ENST00000551132 MCTP1Q6DN14 999 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-228ENST00000551132 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 SMC3Q9UQE7 1217 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 ZNF652Q9Y2D9 606 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
CNOT2-228ENST00000551132 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
CNOT2-228ENST00000551132 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 CYP19A1P11511 503 aaPredicted RBP12.21□□□□□ -0.45
CNOT2-228ENST00000551132 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 BARGINQ6ZT62 677 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 KBTBD3Q8NAB2 608 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.45
CNOT2-228ENST00000551132 SYAP1Q96A49 352 aaPredicted RBP12.21□□□□□ -0.45
CNOT2-228ENST00000551132 AK7Q96M32 723 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 PAG1Q9NWQ8 432 aa12.21□□□□□ -0.45
CNOT2-228ENST00000551132 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 A0A1B0GUL7 405 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 MBD3O95983 291 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
CNOT2-228ENST00000551132 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
CNOT2-228ENST00000551132 AK2P54819 239 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 CTSWP56202 376 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 METTL24Q5JXM2 366 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
CNOT2-228ENST00000551132 FAM227BQ96M60 508 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 GZF1Q9H116 711 aaPredicted RBP12.2□□□□□ -0.46
CNOT2-228ENST00000551132 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 HELLSQ9NRZ9 838 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
CNOT2-228ENST00000551132 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
CNOT2-228ENST00000551132 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 A0A0D9SFI3 127 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 PDE8AO60658 829 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
CNOT2-228ENST00000551132 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
CNOT2-228ENST00000551132 FGD1P98174 961 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 RUFY3Q7L099 469 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 KCNB2Q92953 911 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.463e-6■□□□□ 9.6
CNOT2-228ENST00000551132 ZBTB1Q9Y2K1 713 aa12.19□□□□□ -0.46
CNOT2-228ENST00000551132 GOLIM4O00461 696 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-228ENST00000551132 SLC27A2O14975 620 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 PDCP20941 246 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 GPTP24298 496 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 MRE11P49959 708 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 PTH1RQ03431 593 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 TTF1Q15361 905 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-228ENST00000551132 DDX46Q7L014 1031 aaKnown RBP12.18□□□□□ -0.46
CNOT2-228ENST00000551132 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 IL25Q9H293 177 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 KIF3AQ9Y496 699 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 JCADQ9P266 1359 aa12.18□□□□□ -0.46
CNOT2-228ENST00000551132 SLIT2O94813 1529 aa12.17□□□□□ -0.46
CNOT2-228ENST00000551132 PHF14O94880 888 aa12.17□□□□□ -0.46
CNOT2-228ENST00000551132 BRD1O95696 1058 aa12.17□□□□□ -0.46
CNOT2-228ENST00000551132 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
CNOT2-228ENST00000551132 LDHAL6AQ6ZMR3 332 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms