RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 GCKRQ14397 625 aa19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 TMC4Q7Z404 712 aa19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 RRAGCQ9HB90 399 aa19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 FER1L6Q2WGJ9 1857 aa19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 LAMB2P55268 1798 aa19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 DDX60Q8IY21 1712 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-211ENST00000551063 F6X3S4 739 aa19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 FSTL1Q12841 308 aa19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 BEND3Q5T5X7 828 aa19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 OLFM4Q6UX06 510 aa19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 PSMD1Q99460 953 aa19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 TMX4Q9H1E5 349 aaPredicted RBP19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 ATP6V0A2Q9Y487 856 aa19.61■□□□□ 0.73
PRPF40B-211ENST00000551063 SBF1O95248 1867 aa19.6■□□□□ 0.73
PRPF40B-211ENST00000551063 ZBED9Q6R2W3 1325 aa19.59■□□□□ 0.73
PRPF40B-211ENST00000551063 CACNA1SQ13698 1873 aa19.59■□□□□ 0.73
PRPF40B-211ENST00000551063 GLTPD2A6NH11 291 aa19.59■□□□□ 0.73
PRPF40B-211ENST00000551063 H7C1W4 665 aa19.59■□□□□ 0.73
PRPF40B-211ENST00000551063 CCDC152Q4G0S7 254 aa19.59■□□□□ 0.73
PRPF40B-211ENST00000551063 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
PRPF40B-211ENST00000551063 CTSWP56202 376 aa19.58■□□□□ 0.72
PRPF40B-211ENST00000551063 SP8Q8IXZ3 490 aa19.58■□□□□ 0.72
PRPF40B-211ENST00000551063 JARID2Q92833 1246 aaPredicted RBP19.58■□□□□ 0.72
PRPF40B-211ENST00000551063 PLA2G12BQ9BX93 195 aa19.58■□□□□ 0.72
PRPF40B-211ENST00000551063 CEP350Q5VT06 3117 aa19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 ALDH1L1O75891 902 aa19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 VEGFAP15692 232 aaPredicted RBP19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 CASP7P55210 303 aa19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 DPY19L2Q6NUT2 758 aa19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 UBE3BQ7Z3V4 1068 aa19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 CELF1Q92879 486 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 BCL2L13Q9BXK5 485 aa19.57■□□□□ 0.72
PRPF40B-211ENST00000551063 SRCIN1Q9C0H9 1055 aa19.56■□□□□ 0.72
PRPF40B-211ENST00000551063 RTL9Q8NET4 1388 aa19.56■□□□□ 0.72
PRPF40B-211ENST00000551063 IARSP41252 1262 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-211ENST00000551063 SMC1BQ8NDV3 1235 aa19.55■□□□□ 0.72
PRPF40B-211ENST00000551063 ZNF277Q9NRM2 450 aaPredicted RBP19.55■□□□□ 0.72
PRPF40B-211ENST00000551063 RPS8P62241 208 aaKnown RBP19.54■□□□□ 0.72
PRPF40B-211ENST00000551063 SLC4A10Q6U841 1118 aa19.54■□□□□ 0.72
PRPF40B-211ENST00000551063 SLC51AQ86UW1 340 aa19.54■□□□□ 0.72
PRPF40B-211ENST00000551063 SUPT20HQ8NEM7 779 aa19.54■□□□□ 0.72
PRPF40B-211ENST00000551063 TTLL11Q8NHH1 800 aa19.54■□□□□ 0.72
PRPF40B-211ENST00000551063 RTFDC1Q9BY42 306 aaPredicted RBP19.54■□□□□ 0.72
PRPF40B-211ENST00000551063 GRM8O00222 908 aa19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 DPP8Q6V1X1 898 aaPredicted RBP19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 DNAJC5GQ8N7S2 189 aa19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 VPS33BQ9H267 617 aa19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 SEC31BQ9NQW1 1179 aa19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 TIAM2Q8IVF5 1701 aa19.53■□□□□ 0.72
PRPF40B-211ENST00000551063 KIF16BQ96L93 1317 aa19.52■□□□□ 0.72
PRPF40B-211ENST00000551063 MPNDQ8N594 471 aa19.52■□□□□ 0.72
PRPF40B-211ENST00000551063 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
PRPF40B-211ENST00000551063 CCDC85AQ96PX6 553 aaPredicted RBP19.51■□□□□ 0.71
PRPF40B-211ENST00000551063 GREM2Q9H772 168 aa19.51■□□□□ 0.71
PRPF40B-211ENST00000551063 CSF1RP07333 972 aa19.5■□□□□ 0.71
PRPF40B-211ENST00000551063 ANKRD18AQ8IVF6 992 aa19.5■□□□□ 0.71
PRPF40B-211ENST00000551063 JDP2Q8WYK2 163 aa19.5■□□□□ 0.71
PRPF40B-211ENST00000551063 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
PRPF40B-211ENST00000551063 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-211ENST00000551063 COL4A1P02462 1669 aa19.49■□□□□ 0.71
PRPF40B-211ENST00000551063 LARGE2Q8N3Y3 721 aa19.49■□□□□ 0.71
PRPF40B-211ENST00000551063 DICER1Q9UPY3 1922 aaKnown RBP19.49■□□□□ 0.71
PRPF40B-211ENST00000551063 UTYO14607 1347 aa19.49■□□□□ 0.71
PRPF40B-211ENST00000551063 FZD9O00144 591 aa19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 PPIP5K2O43314 1243 aa19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 IFFO2Q5TF58 517 aa19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 DUOX1Q9NRD9 1551 aa19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 CCDC88AQ3V6T2 1871 aa19.48■□□□□ 0.71
PRPF40B-211ENST00000551063 KIAA2012Q0VF49 1180 aa19.47■□□□□ 0.71
PRPF40B-211ENST00000551063 ARHGAP45Q92619 1136 aa19.47■□□□□ 0.71
PRPF40B-211ENST00000551063 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
PRPF40B-211ENST00000551063 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
PRPF40B-211ENST00000551063 ITGA6P23229 1130 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 CCT4P50991 539 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 GPSM2P81274 684 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 FOXO4P98177 505 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 AOC3Q16853 763 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 NIM1KQ8IY84 436 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 KLRG1Q96E93 195 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 ZNF541Q9H0D2 1346 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 COL4A5P29400 1685 aa19.46■□□□□ 0.71
PRPF40B-211ENST00000551063 WDR90Q96KV7 1748 aa19.45■□□□□ 0.7
PRPF40B-211ENST00000551063 POTECB2RU33 542 aa19.45■□□□□ 0.7
PRPF40B-211ENST00000551063 IGHMBP2P38935 993 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-211ENST00000551063 XDHP47989 1333 aa19.45■□□□□ 0.7
PRPF40B-211ENST00000551063 ANKRD18BA2A2Z9 1011 aa19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 NBPF7P0C2Y1 421 aaPredicted RBP19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 EIF6P56537 245 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 HTRA3P83110 453 aa19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 EPHA10Q5JZY3 1008 aa19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 L3MBTL3Q96JM7 780 aaPredicted RBP19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 EYA3Q99504 573 aa19.44■□□□□ 0.7
PRPF40B-211ENST00000551063 MYH3P11055 1940 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms