RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 CCDC93Q567U6 631 aa15.27■□□□□ 0.04
ERBB3-216ENST00000550869 RIC3Q7Z5B4 369 aa15.27■□□□□ 0.04
ERBB3-216ENST00000550869 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.04
ERBB3-216ENST00000550869 NUP98P52948 1817 aa15.27■□□□□ 0.03
ERBB3-216ENST00000550869 POTECB2RU33 542 aa15.26■□□□□ 0.03
ERBB3-216ENST00000550869 IGKV5-2P06315 115 aa15.26■□□□□ 0.03
ERBB3-216ENST00000550869 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
ERBB3-216ENST00000550869 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
ERBB3-216ENST00000550869 LINS1Q8NG48 757 aa15.26■□□□□ 0.03
ERBB3-216ENST00000550869 C7orf43Q8WVR3 580 aa15.26■□□□□ 0.03
ERBB3-216ENST00000550869 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
ERBB3-216ENST00000550869 IQCA1LA6NCM1 817 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 ALDH1B1P30837 517 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 SLC4A10Q6U841 1118 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 GIGYF2Q6Y7W6 1299 aaKnown RBP15.25■□□□□ 0.03
ERBB3-216ENST00000550869 ISCA1Q9BUE6 129 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
ERBB3-216ENST00000550869 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
ERBB3-216ENST00000550869 KIF6Q6ZMV9 814 aa15.24■□□□□ 0.03
ERBB3-216ENST00000550869 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
ERBB3-216ENST00000550869 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
ERBB3-216ENST00000550869 USP44Q9H0E7 712 aa15.24■□□□□ 0.03
ERBB3-216ENST00000550869 CHMP4BQ9H444 224 aaKnown RBP15.24■□□□□ 0.03
ERBB3-216ENST00000550869 RIC1Q4ADV7 1423 aa15.24■□□□□ 0.03
ERBB3-216ENST00000550869 UTYO14607 1347 aa15.23■□□□□ 0.03
ERBB3-216ENST00000550869 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
ERBB3-216ENST00000550869 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
ERBB3-216ENST00000550869 FKBP4Q02790 459 aaKnown RBP eCLIP15.23■□□□□ 0.03
ERBB3-216ENST00000550869 HLFQ16534 295 aa15.23■□□□□ 0.03
ERBB3-216ENST00000550869 ZBTB3Q9H5J0 574 aa15.23■□□□□ 0.03
ERBB3-216ENST00000550869 ANKRD36CQ5JPF3 1778 aa15.22■□□□□ 0.03
ERBB3-216ENST00000550869 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
ERBB3-216ENST00000550869 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
ERBB3-216ENST00000550869 ZNF34Q8IZ26 560 aa15.22■□□□□ 0.03
ERBB3-216ENST00000550869 MYD88Q99836 296 aa15.22■□□□□ 0.03
ERBB3-216ENST00000550869 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
ERBB3-216ENST00000550869 GCKRQ14397 625 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
ERBB3-216ENST00000550869 CRY2Q49AN0 593 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 GRIPAP1Q4V328 841 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 CCDC191Q8NCU4 936 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 MEIS3Q99687 375 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
ERBB3-216ENST00000550869 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
ERBB3-216ENST00000550869 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
ERBB3-216ENST00000550869 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
ERBB3-216ENST00000550869 H7C1W4 665 aa15.19■□□□□ 0.02
ERBB3-216ENST00000550869 GNAI3P08754 354 aa15.19■□□□□ 0.02
ERBB3-216ENST00000550869 CASP7P55210 303 aa15.19■□□□□ 0.02
ERBB3-216ENST00000550869 PSMD1Q99460 953 aa15.19■□□□□ 0.02
ERBB3-216ENST00000550869 PCDHB15Q9Y5E8 787 aa15.19■□□□□ 0.02
ERBB3-216ENST00000550869 FAM177BA6PVY3 158 aa15.18■□□□□ 0.02
ERBB3-216ENST00000550869 GRM8O00222 908 aa15.18■□□□□ 0.02
ERBB3-216ENST00000550869 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
ERBB3-216ENST00000550869 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
ERBB3-216ENST00000550869 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
ERBB3-216ENST00000550869 CWC25Q9NXE8 425 aaPredicted RBP15.18■□□□□ 0.02
ERBB3-216ENST00000550869 ADAMTSL1Q8N6G6 1762 aa15.18■□□□□ 0.02
ERBB3-216ENST00000550869 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
ERBB3-216ENST00000550869 ABCC12Q96J65 1359 aa15.17■□□□□ 0.02
ERBB3-216ENST00000550869 FZD9O00144 591 aa15.17■□□□□ 0.02
ERBB3-216ENST00000550869 HOXA10P31260 410 aaPredicted RBP15.17■□□□□ 0.02
ERBB3-216ENST00000550869 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
ERBB3-216ENST00000550869 COL13A1Q5TAT6 717 aaPredicted RBP15.17■□□□□ 0.02
ERBB3-216ENST00000550869 PNMA8AQ86V59 439 aaPredicted RBP15.17■□□□□ 0.02
ERBB3-216ENST00000550869 NLRP10Q86W26 655 aa15.17■□□□□ 0.02
ERBB3-216ENST00000550869 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
ERBB3-216ENST00000550869 HACL1Q9UJ83 578 aa15.17■□□□□ 0.02
ERBB3-216ENST00000550869 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
ERBB3-216ENST00000550869 HSPA1AP0DMV8 641 aaKnown RBP15.16■□□□□ 0.02
ERBB3-216ENST00000550869 HSPA1BP0DMV9 641 aaKnown RBP15.16■□□□□ 0.02
ERBB3-216ENST00000550869 GPC2Q8N158 579 aa15.16■□□□□ 0.02
ERBB3-216ENST00000550869 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
ERBB3-216ENST00000550869 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
ERBB3-216ENST00000550869 KAZALD1Q96I82 304 aa15.16■□□□□ 0.02
ERBB3-216ENST00000550869 PASKQ96RG2 1323 aa15.16■□□□□ 0.02
ERBB3-216ENST00000550869 ZNF541Q9H0D2 1346 aa15.16■□□□□ 0.02
ERBB3-216ENST00000550869 GNAI2P04899 355 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 PCCAP05165 728 aaPredicted RBP15.15■□□□□ 0.02
ERBB3-216ENST00000550869 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 PARP10Q53GL7 1025 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 NUTM1Q86Y26 1132 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 C9orf78Q9NZ63 289 aaPredicted RBP15.15■□□□□ 0.02
ERBB3-216ENST00000550869 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
ERBB3-216ENST00000550869 UBTFL1P0CB47 393 aaPredicted RBP15.14■□□□□ 0.01
ERBB3-216ENST00000550869 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
ERBB3-216ENST00000550869 PPP1R42Q7Z4L9 355 aa15.14■□□□□ 0.01
ERBB3-216ENST00000550869 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
ERBB3-216ENST00000550869 TNS4Q8IZW8 715 aa15.14■□□□□ 0.01
ERBB3-216ENST00000550869 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
ERBB3-216ENST00000550869 RBM17Q96I25 401 aaKnown RBP15.14■□□□□ 0.01
ERBB3-216ENST00000550869 CRAMP1Q96RY5 1269 aa15.14■□□□□ 0.01
ERBB3-216ENST00000550869 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 GPTP24298 496 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 EPHX2P34913 555 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 199.1 ms