RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 RETREG3Q86VR2 466 aa7.79□□□□□ -1.16
PTPRR-210ENST00000550661 DDX54Q8TDD1 881 aaKnown RBP7.79□□□□□ -1.16
PTPRR-210ENST00000550661 DDRGK1Q96HY6 314 aa7.79□□□□□ -1.16
PTPRR-210ENST00000550661 FAM117AQ9C073 453 aa7.79□□□□□ -1.16
PTPRR-210ENST00000550661 FCF1Q9Y324 198 aaKnown RBP7.79□□□□□ -1.16
PTPRR-210ENST00000550661 V9GY48 417 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-210ENST00000550661 APAF1O14727 1248 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 SLC19A1P41440 591 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 MMP16P51512 607 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 MTMR2Q13614 643 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 CCDC27Q2M243 656 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 RTF1Q92541 710 aaKnown RBP7.78□□□□□ -1.16
PTPRR-210ENST00000550661 PCDHB15Q9Y5E8 787 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 SCN11AQ9UI33 1791 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 PAPPAQ13219 1627 aa7.78□□□□□ -1.16
PTPRR-210ENST00000550661 RGPD3A6NKT7 1758 aaPredicted RBP7.77□□□□□ -1.17
PTPRR-210ENST00000550661 RGPD4Q7Z3J3 1758 aa7.77□□□□□ -1.17
PTPRR-210ENST00000550661 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
PTPRR-210ENST00000550661 DXOO77932 396 aaKnown RBP7.77□□□□□ -1.17
PTPRR-210ENST00000550661 RIPK4P57078 832 aa7.77□□□□□ -1.17
PTPRR-210ENST00000550661 CALD1Q05682 793 aaKnown RBP7.77□□□□□ -1.17
PTPRR-210ENST00000550661 PLA2G2CQ5R387 149 aa7.77□□□□□ -1.17
PTPRR-210ENST00000550661 LIMD1Q9UGP4 676 aa7.77□□□□□ -1.17
PTPRR-210ENST00000550661 TNS1Q9HBL0 1735 aaKnown RBP7.77□□□□□ -1.17
PTPRR-210ENST00000550661 RNMTO43148 476 aaKnown RBP7.76□□□□□ -1.17
PTPRR-210ENST00000550661 JUNDP17535 347 aa7.76□□□□□ -1.17
PTPRR-210ENST00000550661 MPRIPQ6WCQ1 1025 aa7.76□□□□□ -1.17
PTPRR-210ENST00000550661 LIAT1Q6ZQX7 453 aa7.76□□□□□ -1.17
PTPRR-210ENST00000550661 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
PTPRR-210ENST00000550661 SLC52A2Q9HAB3 445 aa7.76□□□□□ -1.17
PTPRR-210ENST00000550661 POLR3EQ9NVU0 708 aa7.76□□□□□ -1.17
PTPRR-210ENST00000550661 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
PTPRR-210ENST00000550661 SIPA1L3O60292 1781 aaPredicted RBP7.76□□□□□ -1.17
PTPRR-210ENST00000550661 CICQ96RK0 1608 aaPredicted RBP7.75□□□□□ -1.17
PTPRR-210ENST00000550661 SPDYE5A6NIY4 337 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 CLK2P49760 499 aaKnown RBP7.75□□□□□ -1.17
PTPRR-210ENST00000550661 BRPF1P55201 1214 aaPredicted RBP7.75□□□□□ -1.17
PTPRR-210ENST00000550661 TEFQ10587 303 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 FAM182BQ5T319 152 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 MCM10Q7L590 875 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 IL17REQ8NFR9 667 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 ZBTB3Q9H5J0 574 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 TMOD3Q9NYL9 352 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 DLG5Q8TDM6 1919 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 IL16Q14005 1332 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
PTPRR-210ENST00000550661 BTAF1O14981 1849 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 SBF2Q86WG5 1849 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 CABP4P57796 275 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 CCDC24Q8N4L8 307 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 SYTL4Q96C24 671 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-210ENST00000550661 ACSBG1Q96GR2 724 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 IRX2Q9BZI1 471 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-210ENST00000550661 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 BABAM1Q9NWV8 329 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 ZBED9Q6R2W3 1325 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
PTPRR-210ENST00000550661 KCPQ6ZWJ8 1503 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 PALLDQ8WX93 1383 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 ZBTB24O43167 697 aaPredicted RBP7.73□□□□□ -1.17
PTPRR-210ENST00000550661 HNRNPUQ00839 825 aaKnown RBP eCLIP7.73□□□□□ -1.17
PTPRR-210ENST00000550661 DCTN1Q14203 1278 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 PRPF38BQ5VTL8 546 aaKnown RBP7.73□□□□□ -1.17
PTPRR-210ENST00000550661 SPRYD7Q5W111 196 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 CCDC125Q86Z20 511 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 WDR63Q8IWG1 891 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
PTPRR-210ENST00000550661 IFT57Q9NWB7 429 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 UBR2Q8IWV8 1755 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 ITGB4P16144 1822 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 VIRMAQ69YN4 1812 aaKnown RBP7.73□□□□□ -1.17
PTPRR-210ENST00000550661 ZNF831Q5JPB2 1677 aa7.73□□□□□ -1.17
PTPRR-210ENST00000550661 KCNQ2O43526 872 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 TRIM37O94972 964 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
PTPRR-210ENST00000550661 SKIV2LQ15477 1246 aaKnown RBP7.72□□□□□ -1.17
PTPRR-210ENST00000550661 TAF7Q15545 349 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-210ENST00000550661 QPCTQ16769 361 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 SH3D19Q5HYK7 790 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 TTC5Q8N0Z6 440 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 NFATC2IPQ8NCF5 419 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 IL27Q8NEV9 243 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 PIGBQ92521 554 aa7.72□□□□□ -1.17
PTPRR-210ENST00000550661 SMARCC1Q92922 1105 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-210ENST00000550661 RREB1Q92766 1687 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 BTBD11A6QL63 1104 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 ZNF853P0CG23 659 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 RPIAP49247 311 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 GNAI1P63096 354 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 ZNF697Q5TEC3 545 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 ZNF790Q6PG37 636 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 ILDR2Q71H61 639 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 ZNF598Q86UK7 904 aaKnown RBP7.71□□□□□ -1.18
PTPRR-210ENST00000550661 NUDT12Q9BQG2 462 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 TSPYL4Q9UJ04 414 aa7.71□□□□□ -1.18
PTPRR-210ENST00000550661 LY75O60449 1722 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms