RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CAPN15O75808 1086 aa28.27■■■□□ 2.12
SMARCC2-210ENST00000550519 ISCA1Q9BUE6 129 aa28.27■■■□□ 2.12
SMARCC2-210ENST00000550519 GPRC5DQ9NZD1 345 aa28.27■■■□□ 2.12
SMARCC2-210ENST00000550519 KIAA2012Q0VF49 1180 aa28.26■■■□□ 2.11
SMARCC2-210ENST00000550519 LAMB2P55268 1798 aa28.26■■■□□ 2.11
SMARCC2-210ENST00000550519 ADARB2Q9NS39 739 aaKnown RBP28.25■■■□□ 2.11
SMARCC2-210ENST00000550519 WBP1LQ9NX94 342 aa28.25■■■□□ 2.11
SMARCC2-210ENST00000550519 FMR1Q06787 632 aaKnown RBP eCLIP28.24■■■□□ 2.112e-8■■□□□ 12
SMARCC2-210ENST00000550519 DUSP27Q5VZP5 1158 aa28.24■■■□□ 2.11
SMARCC2-210ENST00000550519 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
SMARCC2-210ENST00000550519 ZNF428Q96B54 188 aa28.23■■■□□ 2.11
SMARCC2-210ENST00000550519 PRDM10Q9NQV6 1147 aa28.23■■■□□ 2.11
SMARCC2-210ENST00000550519 HYPKQ9NX55 129 aa28.23■■■□□ 2.11
SMARCC2-210ENST00000550519 ABT1Q9ULW3 272 aaKnown RBP28.23■■■□□ 2.11
SMARCC2-210ENST00000550519 CIAPIN1Q6FI81 312 aa28.22■■■□□ 2.11
SMARCC2-210ENST00000550519 AIDAQ96BJ3 306 aa28.22■■■□□ 2.11
SMARCC2-210ENST00000550519 PRKRIP1Q9H875 184 aaPredicted RBP28.22■■■□□ 2.11
SMARCC2-210ENST00000550519 MBIPQ9NS73 344 aa28.22■■■□□ 2.11
SMARCC2-210ENST00000550519 WDR33Q9C0J8 1336 aaKnown RBP28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 ATP5J2-PTCD1G3V325 749 aa28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 ZNF853P0CG23 659 aa28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 CTCFP49711 727 aaPredicted RBP28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 GMPSP49915 693 aaPredicted RBP28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 SF3B3Q15393 1217 aaKnown RBP28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 FAM89AQ96GI7 184 aa28.21■■■□□ 2.11
SMARCC2-210ENST00000550519 TRIM28Q13263 835 aaKnown RBP28.2■■■□□ 2.1
SMARCC2-210ENST00000550519 CST9Q5W186 159 aa28.2■■■□□ 2.1
SMARCC2-210ENST00000550519 CDHR2Q9BYE9 1310 aa28.19■■■□□ 2.1
SMARCC2-210ENST00000550519 TRAF5O00463 557 aa28.19■■■□□ 2.1
SMARCC2-210ENST00000550519 RAD17O75943 681 aa28.18■■■□□ 2.1
SMARCC2-210ENST00000550519 TNIP1Q15025 636 aa28.18■■■□□ 2.1
SMARCC2-210ENST00000550519 PGAP2Q9UHJ9 254 aa28.18■■■□□ 2.1
SMARCC2-210ENST00000550519 DUOX1Q9NRD9 1551 aa28.18■■■□□ 2.1
SMARCC2-210ENST00000550519 YDJCA8MPS7 323 aa28.17■■■□□ 2.1
SMARCC2-210ENST00000550519 CELF1Q92879 486 aaKnown RBP28.17■■■□□ 2.1
SMARCC2-210ENST00000550519 DDX60Q8IY21 1712 aaKnown RBP28.16■■■□□ 2.1
SMARCC2-210ENST00000550519 APAF1O14727 1248 aa28.16■■■□□ 2.1
SMARCC2-210ENST00000550519 LRRC37AA6NMS7 1700 aa28.15■■■□□ 2.1
SMARCC2-210ENST00000550519 TAF1P21675 1872 aa28.15■■■□□ 2.1
SMARCC2-210ENST00000550519 MAP2K1Q02750 393 aaPredicted RBP28.15■■■□□ 2.1
SMARCC2-210ENST00000550519 BCL2L13Q9BXK5 485 aa28.15■■■□□ 2.1
SMARCC2-210ENST00000550519 IFT57Q9NWB7 429 aa28.15■■■□□ 2.1
SMARCC2-210ENST00000550519 IRS4O14654 1257 aaPredicted RBP28.14■■■□□ 2.1
SMARCC2-210ENST00000550519 HIRAP54198 1017 aaPredicted RBP28.14■■■□□ 2.1
SMARCC2-210ENST00000550519 TLL2Q9Y6L7 1015 aa28.14■■■□□ 2.1
SMARCC2-210ENST00000550519 LBX1P52954 281 aa28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 GNAI1P63096 354 aa28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 WASHC4Q2M389 1173 aa28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 RTL5Q5HYW3 569 aaPredicted RBP28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 ZC3H15Q8WU90 426 aaKnown RBP28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 CAPNS2Q96L46 248 aa28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 NSFL1CQ9UNZ2 370 aaKnown RBP28.13■■■□□ 2.09
SMARCC2-210ENST00000550519 ECE1P42892 770 aa28.12■■■□□ 2.09
SMARCC2-210ENST00000550519 CALD1Q05682 793 aaKnown RBP28.12■■■□□ 2.09
SMARCC2-210ENST00000550519 RIC3Q7Z5B4 369 aa28.12■■■□□ 2.09
SMARCC2-210ENST00000550519 PHAXQ9H814 394 aaKnown RBP28.12■■■□□ 2.09
SMARCC2-210ENST00000550519 CNOT7Q9UIV1 285 aaKnown RBP28.12■■■□□ 2.09
SMARCC2-210ENST00000550519 HSPA8P11142 646 aaKnown RBP28.11■■■□□ 2.09
SMARCC2-210ENST00000550519 GOLGA2Q08379 1002 aa28.11■■■□□ 2.09
SMARCC2-210ENST00000550519 CYP4F22Q6NT55 531 aa28.11■■■□□ 2.09
SMARCC2-210ENST00000550519 TRPM4Q8TD43 1214 aa28.11■■■□□ 2.09
SMARCC2-210ENST00000550519 GLIS2Q9BZE0 524 aaPredicted RBP28.11■■■□□ 2.09
SMARCC2-210ENST00000550519 POLLQ9UGP5 575 aa28.11■■■□□ 2.09
SMARCC2-210ENST00000550519 ELL2O00472 640 aaPredicted RBP28.1■■■□□ 2.09
SMARCC2-210ENST00000550519 GPSM2P81274 684 aa28.1■■■□□ 2.09
SMARCC2-210ENST00000550519 ZBTB38Q8NAP3 1195 aaPredicted RBP28.1■■■□□ 2.09
SMARCC2-210ENST00000550519 COL4A1P02462 1669 aa28.1■■■□□ 2.09
SMARCC2-210ENST00000550519 TRPM7Q96QT4 1865 aa28.09■■■□□ 2.09
SMARCC2-210ENST00000550519 SHTN1A0MZ66 631 aa28.09■■■□□ 2.09
SMARCC2-210ENST00000550519 RPS8P62241 208 aaKnown RBP28.09■■■□□ 2.09
SMARCC2-210ENST00000550519 PAXIP1Q6ZW49 1069 aaPredicted RBP28.09■■■□□ 2.09
SMARCC2-210ENST00000550519 DPF2Q92785 391 aa28.09■■■□□ 2.09
SMARCC2-210ENST00000550519 GPR101Q96P66 508 aaPredicted RBP28.09■■■□□ 2.09
SMARCC2-210ENST00000550519 C6orf229H3BNL8 230 aa28.08■■■□□ 2.09
SMARCC2-210ENST00000550519 CELF2O95319 508 aaKnown RBP28.08■■■□□ 2.09
SMARCC2-210ENST00000550519 SAPCD2Q86UD0 394 aa28.08■■■□□ 2.09
SMARCC2-210ENST00000550519 MICALL2Q8IY33 904 aa28.08■■■□□ 2.09
SMARCC2-210ENST00000550519 DBNDD1Q9H9R9 158 aa28.08■■■□□ 2.09
SMARCC2-210ENST00000550519 ZBTB12Q9Y330 459 aaPredicted RBP28.08■■■□□ 2.09
SMARCC2-210ENST00000550519 THSD7BQ9C0I4 1608 aa28.07■■■□□ 2.08
SMARCC2-210ENST00000550519 H7C1D1 291 aa28.07■■■□□ 2.08
SMARCC2-210ENST00000550519 PSMD14O00487 310 aa28.07■■■□□ 2.08
SMARCC2-210ENST00000550519 CDC37L1Q7L3B6 337 aa28.07■■■□□ 2.08
SMARCC2-210ENST00000550519 C8orf58Q8NAV2 365 aa28.07■■■□□ 2.08
SMARCC2-210ENST00000550519 RIMBP2O15034 1052 aa28.06■■■□□ 2.08
SMARCC2-210ENST00000550519 CCDC191Q8NCU4 936 aa28.06■■■□□ 2.08
SMARCC2-210ENST00000550519 EYA3Q99504 573 aa28.06■■■□□ 2.08
SMARCC2-210ENST00000550519 MYD88Q99836 296 aa28.06■■■□□ 2.08
SMARCC2-210ENST00000550519 HSP90B1P14625 803 aaKnown RBP28.05■■■□□ 2.08
SMARCC2-210ENST00000550519 GRM1Q13255 1194 aa28.05■■■□□ 2.08
SMARCC2-210ENST00000550519 TBC1D16Q8TBP0 767 aa28.05■■■□□ 2.08
SMARCC2-210ENST00000550519 HHIPL1Q96JK4 782 aa28.05■■■□□ 2.08
SMARCC2-210ENST00000550519 PCCAP05165 728 aaPredicted RBP28.04■■■□□ 2.08
SMARCC2-210ENST00000550519 MAP2K2P36507 400 aa28.04■■■□□ 2.08
SMARCC2-210ENST00000550519 SEC31BQ9NQW1 1179 aa28.04■■■□□ 2.08
SMARCC2-210ENST00000550519 PODXL2Q9NZ53 605 aa28.04■■■□□ 2.08
SMARCC2-210ENST00000550519 ECE2O60344 883 aa28.03■■■□□ 2.08
SMARCC2-210ENST00000550519 RPS12P25398 132 aaKnown RBP28.03■■■□□ 2.08
SMARCC2-210ENST00000550519 KCNQ5Q9NR82 932 aa28.03■■■□□ 2.08
SMARCC2-210ENST00000550519 RTL9Q8NET4 1388 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms