RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 TRMT2AQ8IZ69 625 aaKnown RBP22.97■■□□□ 1.27
TUBA1A-206ENST00000550254 DNAAF4Q8WXU2 420 aa22.97■■□□□ 1.27
TUBA1A-206ENST00000550254 RRAGCQ9HB90 399 aa22.97■■□□□ 1.27
TUBA1A-206ENST00000550254 IARSP41252 1262 aaKnown RBP22.96■■□□□ 1.27
TUBA1A-206ENST00000550254 GRIPAP1Q4V328 841 aa22.96■■□□□ 1.27
TUBA1A-206ENST00000550254 SP8Q8IXZ3 490 aa22.96■■□□□ 1.27
TUBA1A-206ENST00000550254 CELF1Q92879 486 aaKnown RBP22.96■■□□□ 1.27
TUBA1A-206ENST00000550254 CDHR2Q9BYE9 1310 aa22.96■■□□□ 1.27
TUBA1A-206ENST00000550254 LRRC37AA6NMS7 1700 aa22.96■■□□□ 1.27
TUBA1A-206ENST00000550254 COL4A5P29400 1685 aa22.95■■□□□ 1.26
TUBA1A-206ENST00000550254 WDR90Q96KV7 1748 aa22.94■■□□□ 1.26
TUBA1A-206ENST00000550254 F6X3S4 739 aa22.94■■□□□ 1.26
TUBA1A-206ENST00000550254 PDE8AO60658 829 aa22.94■■□□□ 1.26
TUBA1A-206ENST00000550254 H7C1W4 665 aa22.93■■□□□ 1.26
TUBA1A-206ENST00000550254 HSP90B1P14625 803 aaKnown RBP22.93■■□□□ 1.26
TUBA1A-206ENST00000550254 DPY19L2Q6NUT2 758 aa22.93■■□□□ 1.26
TUBA1A-206ENST00000550254 MYH3P11055 1940 aa22.92■■□□□ 1.26
TUBA1A-206ENST00000550254 POTECB2RU33 542 aa22.92■■□□□ 1.26
TUBA1A-206ENST00000550254 GCKRQ14397 625 aa22.92■■□□□ 1.26
TUBA1A-206ENST00000550254 LINS1Q8NG48 757 aa22.92■■□□□ 1.26
TUBA1A-206ENST00000550254 TMX4Q9H1E5 349 aaPredicted RBP22.92■■□□□ 1.26
TUBA1A-206ENST00000550254 SEC31BQ9NQW1 1179 aa22.92■■□□□ 1.26
TUBA1A-206ENST00000550254 DDNO94850 711 aaPredicted RBP22.91■■□□□ 1.26
TUBA1A-206ENST00000550254 TMC4Q7Z404 712 aa22.91■■□□□ 1.26
TUBA1A-206ENST00000550254 MRPL50Q8N5N7 158 aaKnown RBP22.91■■□□□ 1.26
TUBA1A-206ENST00000550254 RTFDC1Q9BY42 306 aaPredicted RBP22.91■■□□□ 1.26
TUBA1A-206ENST00000550254 DUOX1Q9NRD9 1551 aa22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 FZD9O00144 591 aa22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 TOMM70O94826 608 aa22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 CASP7P55210 303 aa22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 BEND3Q5T5X7 828 aa22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 MPNDQ8N594 471 aa22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 CCDC85AQ96PX6 553 aaPredicted RBP22.9■■□□□ 1.26
TUBA1A-206ENST00000550254 ZNF541Q9H0D2 1346 aa22.89■■□□□ 1.26
TUBA1A-206ENST00000550254 RPS8P62241 208 aaKnown RBP22.89■■□□□ 1.25
TUBA1A-206ENST00000550254 CCDC152Q4G0S7 254 aa22.89■■□□□ 1.25
TUBA1A-206ENST00000550254 UBE3BQ7Z3V4 1068 aa22.89■■□□□ 1.25
TUBA1A-206ENST00000550254 VEGFAP15692 232 aaPredicted RBP22.88■■□□□ 1.25
TUBA1A-206ENST00000550254 CTSWP56202 376 aa22.88■■□□□ 1.25
TUBA1A-206ENST00000550254 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
TUBA1A-206ENST00000550254 TTLL11Q8NHH1 800 aa22.88■■□□□ 1.25
TUBA1A-206ENST00000550254 SSH1Q8WYL5 1049 aa22.88■■□□□ 1.25
TUBA1A-206ENST00000550254 LARGE2Q8N3Y3 721 aa22.87■■□□□ 1.25
TUBA1A-206ENST00000550254 JDP2Q8WYK2 163 aa22.87■■□□□ 1.25
TUBA1A-206ENST00000550254 LTBP1Q14766 1721 aa22.87■■□□□ 1.25
TUBA1A-206ENST00000550254 AOC3Q16853 763 aa22.86■■□□□ 1.25
TUBA1A-206ENST00000550254 SUPT20HQ8NEM7 779 aa22.86■■□□□ 1.25
TUBA1A-206ENST00000550254 PLA2G12BQ9BX93 195 aa22.86■■□□□ 1.25
TUBA1A-206ENST00000550254 VPS33BQ9H267 617 aa22.86■■□□□ 1.25
TUBA1A-206ENST00000550254 PPIP5K2O43314 1243 aa22.85■■□□□ 1.25
TUBA1A-206ENST00000550254 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
TUBA1A-206ENST00000550254 RBM46Q8TBY0 533 aaKnown RBP22.85■■□□□ 1.25
TUBA1A-206ENST00000550254 GPSM2P81274 684 aa22.84■■□□□ 1.25
TUBA1A-206ENST00000550254 BCL2L13Q9BXK5 485 aa22.84■■□□□ 1.25
TUBA1A-206ENST00000550254 GREM2Q9H772 168 aa22.84■■□□□ 1.25
TUBA1A-206ENST00000550254 NSFL1CQ9UNZ2 370 aaKnown RBP22.84■■□□□ 1.25
TUBA1A-206ENST00000550254 SCN4AP35499 1836 aa22.83■■□□□ 1.25
TUBA1A-206ENST00000550254 SPEF2Q9C093 1822 aa22.83■■□□□ 1.25
TUBA1A-206ENST00000550254 KIAA2012Q0VF49 1180 aa22.83■■□□□ 1.25
TUBA1A-206ENST00000550254 ALDH1L2Q3SY69 923 aa22.83■■□□□ 1.25
TUBA1A-206ENST00000550254 L3MBTL3Q96JM7 780 aaPredicted RBP22.83■■□□□ 1.25
TUBA1A-206ENST00000550254 RTL9Q8NET4 1388 aa22.83■■□□□ 1.25
TUBA1A-206ENST00000550254 CSF1RP07333 972 aa22.82■■□□□ 1.24
TUBA1A-206ENST00000550254 SLC4A10Q6U841 1118 aa22.82■■□□□ 1.24
TUBA1A-206ENST00000550254 NIM1KQ8IY84 436 aa22.82■■□□□ 1.24
TUBA1A-206ENST00000550254 PTPRCP08575 1304 aa22.82■■□□□ 1.24
TUBA1A-206ENST00000550254 ALDH1L1O75891 902 aa22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 CT47B1P0C2W7 299 aaPredicted RBP22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 EIF6P56537 245 aaKnown RBP22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 ANKRD18AQ8IVF6 992 aa22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 GPC2Q8N158 579 aa22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 SRCIN1Q9C0H9 1055 aa22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 POLLQ9UGP5 575 aa22.81■■□□□ 1.24
TUBA1A-206ENST00000550254 PODXL2Q9NZ53 605 aa22.8■■□□□ 1.24
TUBA1A-206ENST00000550254 GRM8O00222 908 aa22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 HSPA6P17066 643 aa22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 FOXO4P98177 505 aa22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 TBC1D16Q8TBP0 767 aa22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 CDC5LQ99459 802 aaKnown RBP22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 ZNRF3Q9ULT6 936 aa22.79■■□□□ 1.24
TUBA1A-206ENST00000550254 FSTL1Q12841 308 aa22.78■■□□□ 1.24
TUBA1A-206ENST00000550254 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
TUBA1A-206ENST00000550254 SMC4Q9NTJ3 1288 aa22.78■■□□□ 1.24
TUBA1A-206ENST00000550254 GJA3Q9Y6H8 435 aa22.78■■□□□ 1.24
TUBA1A-206ENST00000550254 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
TUBA1A-206ENST00000550254 ITGA6P23229 1130 aa22.77■■□□□ 1.24
TUBA1A-206ENST00000550254 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
TUBA1A-206ENST00000550254 EPHA10Q5JZY3 1008 aa22.77■■□□□ 1.24
TUBA1A-206ENST00000550254 GPR101Q96P66 508 aaPredicted RBP22.77■■□□□ 1.24
TUBA1A-206ENST00000550254 BSDC1Q9NW68 430 aaPredicted RBP22.77■■□□□ 1.24
TUBA1A-206ENST00000550254 IQCA1LA6NCM1 817 aa22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 RIMBP2O15034 1052 aa22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 POTEIP0CG38 1075 aa22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 POTEJP0CG39 1038 aa22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 CXCL9Q07325 125 aa22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 SMC1BQ8NDV3 1235 aa22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 TAF1DQ9H5J8 278 aaPredicted RBP22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 C9orf78Q9NZ63 289 aaPredicted RBP22.76■■□□□ 1.23
TUBA1A-206ENST00000550254 YDJCA8MPS7 323 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms