RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 MTMR6Q9Y217 621 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 GOLGB1Q14789 3259 aaKnown RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 A0A087WWV3 80 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 KRT85P78386 507 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 COL9A3Q14050 684 aaPredicted RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 TPD52L1Q16890 204 aaPredicted RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 KIF1BPQ96EK5 621 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
SMARCC2-208ENST00000550150 TTC6Q86TZ1 520 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 CCDC8Q9H0W5 538 aaPredicted RBP12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 BTG4Q9NY30 223 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 TYRO3Q06418 890 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 HYPKQ9NX55 129 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 AACSQ86V21 672 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 FAM227BQ96M60 508 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 DNAJC25Q9H1X3 360 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
SMARCC2-208ENST00000550150 TNNT1P13805 278 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 FILIP1Q7Z7B0 1213 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 STAP2Q9UGK3 403 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 C5P01031 1676 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 DMTNQ08495 405 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 RUFY2Q8WXA3 655 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 TTC14Q96N46 770 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 BOLA2Q9H3K6 86 aa12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
SMARCC2-208ENST00000550150 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 TOM1L2Q6ZVM7 507 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 FAM200AQ8TCP9 573 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 UBAP1LF5GYI3 381 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 PHKG2P15735 406 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
SMARCC2-208ENST00000550150 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 H3BQV1 296 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 PLEKHO1Q53GL0 409 aaPredicted RBP12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 CBX8Q9HC52 389 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
SMARCC2-208ENST00000550150 GOLGA6L19H0YKK7 550 aa12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 ZNF165P49910 485 aa12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 CCDC112Q8NEF3 446 aa12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 EDC3Q96F86 508 aaKnown RBP12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
SMARCC2-208ENST00000550150 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 ARID5BQ14865 1188 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 TMEM87AQ8NBN3 555 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 GPATCH3Q96I76 525 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 SPTLC3Q9NUV7 552 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 MRC1P22897 1456 aa12.71□□□□□ -0.38
SMARCC2-208ENST00000550150 NR1I2O75469 434 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 PLEKHG2Q9H7P9 1386 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 LAMB4A4D0S4 1761 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 BECN2A8MW95 431 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 CREB3L3Q68CJ9 461 aa12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 CGNQ9P2M7 1197 aaKnown RBP12.7□□□□□ -0.38
SMARCC2-208ENST00000550150 JAK2O60674 1132 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 EIF4A1P60842 406 aaKnown RBP12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 TEFQ10587 303 aa12.69□□□□□ -0.38
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