RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 GRAPQ13588 217 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 SP8Q8IXZ3 490 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 MIER1Q8N108 512 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 SUPT20HQ8NEM7 779 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 JDP2Q8WYK2 163 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 PSMD1Q99460 953 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 RRAGCQ9HB90 399 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 NMRK2Q9NPI5 230 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 ZNF277Q9NRM2 450 aaPredicted RBP8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 ABCC4O15439 1325 aa8.18□□□□□ -1.1
TMEM106C-213ENST00000550146 MYH3P11055 1940 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 NEURL1BA8MQ27 555 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 KIF3CO14782 793 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 PDE8AO60658 829 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 TOMM70O94826 608 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 IGKV5-2P06315 115 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 VEGFAP15692 232 aaPredicted RBP8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 SLFN5Q08AF3 891 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 CCDC152Q4G0S7 254 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 MPNDQ8N594 471 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 DNAAF4Q8WXU2 420 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 JARID2Q92833 1246 aaPredicted RBP8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 SNED1Q8TER0 1413 aa8.17□□□□□ -1.1
TMEM106C-213ENST00000550146 GCKRQ14397 625 aa8.16□□□□□ -1.1
TMEM106C-213ENST00000550146 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
TMEM106C-213ENST00000550146 LARGE2Q8N3Y3 721 aa8.16□□□□□ -1.1
TMEM106C-213ENST00000550146 LINS1Q8NG48 757 aa8.16□□□□□ -1.1
TMEM106C-213ENST00000550146 CDHR2Q9BYE9 1310 aa8.16□□□□□ -1.1
TMEM106C-213ENST00000550146 VPS33BQ9H267 617 aa8.16□□□□□ -1.1
TMEM106C-213ENST00000550146 PPIP5K2O43314 1243 aa8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 EIF6P56537 245 aaKnown RBP8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 RPS8P62241 208 aaKnown RBP8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 UBE3BQ7Z3V4 1068 aa8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 NIM1KQ8IY84 436 aa8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 CELF1Q92879 486 aaKnown RBP8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 CDCA7LQ96GN5 454 aa8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 NSFL1CQ9UNZ2 370 aaKnown RBP8.15□□□□□ -1.1
TMEM106C-213ENST00000550146 IQCA1LA6NCM1 817 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 F6X3S4 739 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 C6orf229H3BNL8 230 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 H7C1W4 665 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 FZD9O00144 591 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 DDNO94850 711 aaPredicted RBP8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 CTSWP56202 376 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 ANKRD18AQ8IVF6 992 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 MRPL50Q8N5N7 158 aaKnown RBP8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 CDC5LQ99459 802 aaKnown RBP8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 RTFDC1Q9BY42 306 aaPredicted RBP8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 LRRC37AA6NMS7 1700 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 WDR90Q96KV7 1748 aa8.14□□□□□ -1.11
TMEM106C-213ENST00000550146 PTPRCP08575 1304 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 ZNF541Q9H0D2 1346 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 CT47B1P0C2W7 299 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 FSTL1Q12841 308 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 AOC3Q16853 763 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 ALDH1L2Q3SY69 923 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 BEND3Q5T5X7 828 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 GPC2Q8N158 579 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 SMC1BQ8NDV3 1235 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 TTLL11Q8NHH1 800 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 EYA3Q99504 573 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 C9orf78Q9NZ63 289 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 ANKIB1Q9P2G1 1089 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 ZNRF3Q9ULT6 936 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 GJA3Q9Y6H8 435 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 SCN4AP35499 1836 aa8.13□□□□□ -1.11
TMEM106C-213ENST00000550146 COL4A1P02462 1669 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 G3V3G9 751 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 ALDH1L1O75891 902 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 HSPA6P17066 643 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 LMOD1P29536 600 aaPredicted RBP8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 GPSM2P81274 684 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 HNRNPUQ00839 825 aaKnown RBP eCLIP8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 KIAA2012Q0VF49 1180 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 WASHC4Q2M389 1173 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 DCAF8Q5TAQ9 597 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 SSH1Q8WYL5 1049 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 GREM2Q9H772 168 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 SMC4Q9NTJ3 1288 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 HACL1Q9UJ83 578 aa8.12□□□□□ -1.11
TMEM106C-213ENST00000550146 RTL9Q8NET4 1388 aa8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 POTECB2RU33 542 aa8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 GRM8O00222 908 aa8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 IGHMBP2P38935 993 aaKnown RBP8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 CASP7P55210 303 aa8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 TNIP1Q15025 636 aa8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
TMEM106C-213ENST00000550146 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms