RNA–Protein interactions for RNA: ENST00000550136.1

PTCH1-220, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 2,388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-220ENST00000550136 NAIPQ13075 1403 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 TNS3Q68CZ2 1445 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 USP8P40818 1118 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 FAM98CQ17RN3 349 aaKnown RBP11.01□□□□□ -0.65
PTCH1-220ENST00000550136 MCTP1Q6DN14 999 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 TEX11Q8IYF3 940 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-220ENST00000550136 GIMAP7Q8NHV1 300 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 AK7Q96M32 723 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 PPP1R1BQ9UD71 204 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-220ENST00000550136 ZNF232Q9UNY5 417 aa11.01□□□□□ -0.65
PTCH1-220ENST00000550136 SPATA31E1Q6ZUB1 1445 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 THSD7AQ9UPZ6 1657 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 GABBR2O75899 941 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 PLA2G4AP47712 749 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 GRIK3Q13003 919 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 KRT28Q7Z3Y7 464 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 SDR16C5Q8N3Y7 309 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 PROCA1Q8NCQ7 364 aaPredicted RBP11□□□□□ -0.65
PTCH1-220ENST00000550136 THOC1Q96FV9 657 aaKnown RBP11□□□□□ -0.65
PTCH1-220ENST00000550136 MAF1Q9H063 256 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 SLC24A3Q9HC58 644 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 SPON1Q9HCB6 807 aa11□□□□□ -0.65
PTCH1-220ENST00000550136 MYBL2P10244 700 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 ST5P78524 1137 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 ZRSR1Q15695 479 aaKnown RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 A1CFQ9NQ94 594 aaKnown RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 GNL3LQ9NVN8 582 aaKnown RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 PYCARDQ9ULZ3 195 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 CLTCL1P53675 1640 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 ROCK1Q13464 1354 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 C1QTNF8P60827 252 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 ICA1Q05084 483 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 PDCD2Q16342 344 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 FAM177A1Q8N128 213 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 TMEM63CQ9P1W3 806 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 IL16Q14005 1332 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 MYBBP1AQ9BQG0 1328 aaKnown RBP10.99□□□□□ -0.65
PTCH1-220ENST00000550136 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
PTCH1-220ENST00000550136 U2SURPO15042 1029 aaKnown RBP10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ACTN2P35609 894 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 NBPF8Q3BBV2 869 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 NBPF14Q5TI25 921 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ZNF483Q8TF39 744 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-220ENST00000550136 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 SBNO1A3KN83 1393 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 KCNQ2O43526 872 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 PNMA6AP0CW24 399 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-220ENST00000550136 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
PTCH1-220ENST00000550136 H2AFXP16104 143 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ELF1P32519 619 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 RPS6KA3P51812 740 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 PSME1Q06323 249 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 PSMD2Q13200 908 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 HDGFL1Q5TGJ6 251 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 NUTM2GQ5VZR2 741 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ACRBPQ8NEB7 543 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 RANBP17Q9H2T7 1088 aaKnown RBP10.98□□□□□ -0.65
PTCH1-220ENST00000550136 VEZTQ9HBM0 779 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 KIF1BO60333 1816 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 CGNL1Q0VF96 1302 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
PTCH1-220ENST00000550136 ECEL1O95672 775 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 GCFC2P16383 781 aaKnown RBP10.97□□□□□ -0.65
PTCH1-220ENST00000550136 MNAT1P51948 309 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 TBC1D25Q3MII6 688 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 CCDC30Q5VVM6 783 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 LEKR1Q6ZMV7 388 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 NLRP13Q86W25 1043 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 PRPF38AQ8NAV1 312 aaKnown RBP10.97□□□□□ -0.65
PTCH1-220ENST00000550136 EXOC4Q96A65 974 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 TRIM6Q9C030 488 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-220ENST00000550136 KCNF1Q9H3M0 494 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 CAMTA1Q9Y6Y1 1673 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 ARHGEF10O15013 1369 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 KIF2AO00139 706 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-220ENST00000550136 ADCY5O95622 1261 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 NUTM1Q86Y26 1132 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 UBXN6Q9BZV1 441 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 SPATS2LQ9NUQ6 558 aaKnown RBP10.97□□□□□ -0.65
PTCH1-220ENST00000550136 TBC1D2BQ9UPU7 963 aa10.97□□□□□ -0.65
PTCH1-220ENST00000550136 COL14A1Q05707 1796 aaKnown RBP10.97□□□□□ -0.65
PTCH1-220ENST00000550136 RPS6KA5O75582 802 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 FAM182BQ5T319 152 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-220ENST00000550136 FAM196AQ6ZSG2 479 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 KIF2CQ99661 725 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 CHCHD3Q9NX63 227 aaKnown RBP10.96□□□□□ -0.65
PTCH1-220ENST00000550136 TRAK1Q9UPV9 953 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-220ENST00000550136 SPATA31A5Q5VU36 1347 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms