RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 GPR101Q96P66 508 aaPredicted RBP20.58■□□□□ 0.89
COX6A1-203ENST00000550009 POLR2AP24928 1970 aaKnown RBP20.57■□□□□ 0.88
COX6A1-203ENST00000550009 EPHX2P34913 555 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 EPS15P42566 896 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 SCNN1DP51172 638 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
COX6A1-203ENST00000550009 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 CCDC27Q2M243 656 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 SP8Q8IXZ3 490 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
COX6A1-203ENST00000550009 SEC31BQ9NQW1 1179 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 HACL1Q9UJ83 578 aa20.57■□□□□ 0.88
COX6A1-203ENST00000550009 BBOX1O75936 387 aa20.56■□□□□ 0.88
COX6A1-203ENST00000550009 TRIM28Q13263 835 aaKnown RBP20.56■□□□□ 0.88
COX6A1-203ENST00000550009 SF3B3Q15393 1217 aaKnown RBP20.56■□□□□ 0.88
COX6A1-203ENST00000550009 GPC2Q8N158 579 aa20.56■□□□□ 0.88
COX6A1-203ENST00000550009 RTFDC1Q9BY42 306 aaPredicted RBP20.56■□□□□ 0.88
COX6A1-203ENST00000550009 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
COX6A1-203ENST00000550009 IQCA1LA6NCM1 817 aa20.55■□□□□ 0.88
COX6A1-203ENST00000550009 IGKV5-2P06315 115 aa20.55■□□□□ 0.88
COX6A1-203ENST00000550009 CCDC30Q5VVM6 783 aa20.55■□□□□ 0.88
COX6A1-203ENST00000550009 MAP1SQ66K74 1059 aaPredicted RBP20.55■□□□□ 0.88
COX6A1-203ENST00000550009 DPP8Q6V1X1 898 aaPredicted RBP20.55■□□□□ 0.88
COX6A1-203ENST00000550009 NIM1KQ8IY84 436 aa20.55■□□□□ 0.88
COX6A1-203ENST00000550009 MPNDQ8N594 471 aa20.55■□□□□ 0.88
COX6A1-203ENST00000550009 METTL22Q9BUU2 404 aaPredicted RBP20.55■□□□□ 0.88
COX6A1-203ENST00000550009 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 SHTN1A0MZ66 631 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 YDJCA8MPS7 323 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 ITGBL1O95965 494 aaPredicted RBP20.54■□□□□ 0.88
COX6A1-203ENST00000550009 EIF6P56537 245 aaKnown RBP20.54■□□□□ 0.88
COX6A1-203ENST00000550009 CXCL9Q07325 125 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
COX6A1-203ENST00000550009 LDHDQ86WU2 507 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 TRPM7Q96QT4 1865 aa20.54■□□□□ 0.88
COX6A1-203ENST00000550009 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
COX6A1-203ENST00000550009 GPSM2P81274 684 aa20.53■□□□□ 0.88
COX6A1-203ENST00000550009 CWF19L2Q2TBE0 894 aaKnown RBP20.53■□□□□ 0.88
COX6A1-203ENST00000550009 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
COX6A1-203ENST00000550009 CLEC11AQ9Y240 323 aa20.53■□□□□ 0.88
COX6A1-203ENST00000550009 RAD17O75943 681 aa20.52■□□□□ 0.88
COX6A1-203ENST00000550009 JMYQ8N9B5 988 aa20.52■□□□□ 0.88
COX6A1-203ENST00000550009 POLLQ9UGP5 575 aa20.52■□□□□ 0.88
COX6A1-203ENST00000550009 WTIPA6NIX2 430 aaPredicted RBP20.51■□□□□ 0.87
COX6A1-203ENST00000550009 KCNQ5Q9NR82 932 aa20.51■□□□□ 0.87
COX6A1-203ENST00000550009 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
COX6A1-203ENST00000550009 RIMBP2O15034 1052 aa20.5■□□□□ 0.87
COX6A1-203ENST00000550009 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
COX6A1-203ENST00000550009 PCCAP05165 728 aaPredicted RBP20.5■□□□□ 0.87
COX6A1-203ENST00000550009 EXOSC9Q06265 439 aaKnown RBP20.5■□□□□ 0.87
COX6A1-203ENST00000550009 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
COX6A1-203ENST00000550009 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
COX6A1-203ENST00000550009 KSR2Q6VAB6 950 aa20.5■□□□□ 0.87
COX6A1-203ENST00000550009 CWC25Q9NXE8 425 aaPredicted RBP20.5■□□□□ 0.87
COX6A1-203ENST00000550009 ZNRF3Q9ULT6 936 aa20.5■□□□□ 0.87
COX6A1-203ENST00000550009 CCDC191Q8NCU4 936 aa20.49■□□□□ 0.87
COX6A1-203ENST00000550009 DBNDD1Q9H9R9 158 aa20.49■□□□□ 0.87
COX6A1-203ENST00000550009 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
COX6A1-203ENST00000550009 IL16Q14005 1332 aa20.49■□□□□ 0.87
COX6A1-203ENST00000550009 VAMP4O75379 141 aa20.48■□□□□ 0.87
COX6A1-203ENST00000550009 GMPSP49915 693 aaPredicted RBP20.48■□□□□ 0.87
COX6A1-203ENST00000550009 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
COX6A1-203ENST00000550009 CNTROBQ8N137 903 aa20.48■□□□□ 0.87
COX6A1-203ENST00000550009 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
COX6A1-203ENST00000550009 PSME4Q14997 1843 aa20.48■□□□□ 0.87
COX6A1-203ENST00000550009 DOK7Q18PE1 504 aa20.47■□□□□ 0.87
COX6A1-203ENST00000550009 SUPT20HQ8NEM7 779 aa20.47■□□□□ 0.87
COX6A1-203ENST00000550009 ZBTB12Q9Y330 459 aaPredicted RBP20.47■□□□□ 0.87
COX6A1-203ENST00000550009 ZNF646O15015 1829 aaPredicted RBP20.47■□□□□ 0.87
COX6A1-203ENST00000550009 NEURL1BA8MQ27 555 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 C6orf229H3BNL8 230 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 TRAF5O00463 557 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 PDE8AO60658 829 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 DDX58O95786 925 aaKnown RBP20.46■□□□□ 0.87
COX6A1-203ENST00000550009 STK31Q9BXU1 1019 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 CREBZFQ9NS37 354 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 GPRC5DQ9NZD1 345 aa20.46■□□□□ 0.87
COX6A1-203ENST00000550009 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
COX6A1-203ENST00000550009 LMOD1P29536 600 aaPredicted RBP20.45■□□□□ 0.86
COX6A1-203ENST00000550009 HIRAP54198 1017 aaPredicted RBP20.45■□□□□ 0.86
COX6A1-203ENST00000550009 FLIIQ13045 1269 aa20.45■□□□□ 0.86
COX6A1-203ENST00000550009 CIAPIN1Q6FI81 312 aa20.45■□□□□ 0.86
COX6A1-203ENST00000550009 DLK2Q6UY11 383 aa20.45■□□□□ 0.86
COX6A1-203ENST00000550009 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
COX6A1-203ENST00000550009 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
COX6A1-203ENST00000550009 WASHC4Q2M389 1173 aa20.44■□□□□ 0.86
COX6A1-203ENST00000550009 PNMA8AQ86V59 439 aaPredicted RBP20.44■□□□□ 0.86
COX6A1-203ENST00000550009 TRPM4Q8TD43 1214 aa20.44■□□□□ 0.86
COX6A1-203ENST00000550009 VPS33BQ9H267 617 aa20.44■□□□□ 0.86
COX6A1-203ENST00000550009 GREM2Q9H772 168 aa20.44■□□□□ 0.86
COX6A1-203ENST00000550009 RTL9Q8NET4 1388 aa20.44■□□□□ 0.86
COX6A1-203ENST00000550009 F6X3S4 739 aa20.43■□□□□ 0.86
COX6A1-203ENST00000550009 PSMD14O00487 310 aa20.43■□□□□ 0.86
COX6A1-203ENST00000550009 EGFRP00533 1210 aa20.43■□□□□ 0.86
COX6A1-203ENST00000550009 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
COX6A1-203ENST00000550009 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms