RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 RTKN2Q8IZC4 609 aa18.87■□□□□ 0.61
GPN3-206ENST00000549963 HDAC5Q9UQL6 1122 aa18.87■□□□□ 0.61
GPN3-206ENST00000549963 MYH3P11055 1940 aa18.86■□□□□ 0.61
GPN3-206ENST00000549963 PPEF1O14829 653 aaPredicted RBP18.86■□□□□ 0.61
GPN3-206ENST00000549963 CTSWP56202 376 aa18.86■□□□□ 0.61
GPN3-206ENST00000549963 GRAPQ13588 217 aa18.86■□□□□ 0.61
GPN3-206ENST00000549963 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
GPN3-206ENST00000549963 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
GPN3-206ENST00000549963 GRAPLQ8TC17 118 aaPredicted RBP18.86■□□□□ 0.61
GPN3-206ENST00000549963 PLA2G12BQ9BX93 195 aa18.86■□□□□ 0.61
GPN3-206ENST00000549963 ABCC4O15439 1325 aa18.84■□□□□ 0.61
GPN3-206ENST00000549963 RPS8P62241 208 aaKnown RBP18.84■□□□□ 0.61
GPN3-206ENST00000549963 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
GPN3-206ENST00000549963 C7orf43Q8WVR3 580 aa18.84■□□□□ 0.61
GPN3-206ENST00000549963 CDC5LQ99459 802 aaKnown RBP18.84■□□□□ 0.61
GPN3-206ENST00000549963 MS4A1P11836 297 aa18.83■□□□□ 0.6
GPN3-206ENST00000549963 YY1P25490 414 aa18.83■□□□□ 0.6
GPN3-206ENST00000549963 CASP7P55210 303 aa18.83■□□□□ 0.6
GPN3-206ENST00000549963 SP8Q8IXZ3 490 aa18.83■□□□□ 0.6
GPN3-206ENST00000549963 RCAN3Q9UKA8 241 aa18.83■□□□□ 0.6
GPN3-206ENST00000549963 ATP6V0A2Q9Y487 856 aa18.83■□□□□ 0.6
GPN3-206ENST00000549963 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
GPN3-206ENST00000549963 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
GPN3-206ENST00000549963 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
GPN3-206ENST00000549963 CCDC85AQ96PX6 553 aaPredicted RBP18.82■□□□□ 0.6
GPN3-206ENST00000549963 TAOK3Q9H2K8 898 aa18.82■□□□□ 0.6
GPN3-206ENST00000549963 TRIM27P14373 513 aa18.81■□□□□ 0.6
GPN3-206ENST00000549963 LMNB1P20700 586 aa18.81■□□□□ 0.6
GPN3-206ENST00000549963 INTS3Q68E01 1043 aaKnown RBP18.81■□□□□ 0.6
GPN3-206ENST00000549963 CHMP3Q9Y3E7 222 aa18.81■□□□□ 0.6
GPN3-206ENST00000549963 UTYO14607 1347 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 TAF1P21675 1872 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 CSF1RP07333 972 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 NBPF7P0C2Y1 421 aaPredicted RBP18.8■□□□□ 0.6
GPN3-206ENST00000549963 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.8■□□□□ 0.6
GPN3-206ENST00000549963 CLUAP1Q96AJ1 413 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 USP44Q9H0E7 712 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
GPN3-206ENST00000549963 LTBP3Q9NS15 1303 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 UBTFL1P0CB47 393 aaPredicted RBP18.79■□□□□ 0.6
GPN3-206ENST00000549963 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
GPN3-206ENST00000549963 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
GPN3-206ENST00000549963 IFIT5Q13325 482 aaKnown RBP18.79■□□□□ 0.6
GPN3-206ENST00000549963 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
GPN3-206ENST00000549963 MPNDQ8N594 471 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 CELF1Q92879 486 aaKnown RBP18.79■□□□□ 0.6
GPN3-206ENST00000549963 GREM2Q9H772 168 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 SBF1O95248 1867 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 RTL9Q8NET4 1388 aa18.79■□□□□ 0.6
GPN3-206ENST00000549963 GNAI3P08754 354 aa18.78■□□□□ 0.6
GPN3-206ENST00000549963 FOXO4P98177 505 aa18.78■□□□□ 0.6
GPN3-206ENST00000549963 RASSF7Q02833 373 aa18.78■□□□□ 0.6
GPN3-206ENST00000549963 LMBR1LQ6UX01 489 aa18.78■□□□□ 0.6
GPN3-206ENST00000549963 PSMD1Q99460 953 aa18.78■□□□□ 0.6
GPN3-206ENST00000549963 NFKBIEO00221 500 aa18.77■□□□□ 0.6
GPN3-206ENST00000549963 ITGA6P23229 1130 aa18.77■□□□□ 0.6
GPN3-206ENST00000549963 TAF7LQ5H9L4 462 aa18.77■□□□□ 0.6
GPN3-206ENST00000549963 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
GPN3-206ENST00000549963 MPHOSPH8Q99549 860 aa18.77■□□□□ 0.6
GPN3-206ENST00000549963 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
GPN3-206ENST00000549963 SUCLG2Q96I99 432 aa18.76■□□□□ 0.59
GPN3-206ENST00000549963 VPS33BQ9H267 617 aa18.76■□□□□ 0.59
GPN3-206ENST00000549963 BSDC1Q9NW68 430 aaPredicted RBP18.76■□□□□ 0.59
GPN3-206ENST00000549963 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
GPN3-206ENST00000549963 ANKIB1Q9P2G1 1089 aa18.75■□□□□ 0.59
GPN3-206ENST00000549963 NSFL1CQ9UNZ2 370 aaKnown RBP18.75■□□□□ 0.59
GPN3-206ENST00000549963 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
GPN3-206ENST00000549963 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
GPN3-206ENST00000549963 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
GPN3-206ENST00000549963 ITPRIPQ8IWB1 547 aa18.73■□□□□ 0.59
GPN3-206ENST00000549963 TMEM57Q8N5G2 664 aa18.73■□□□□ 0.59
GPN3-206ENST00000549963 JDP2Q8WYK2 163 aa18.73■□□□□ 0.59
GPN3-206ENST00000549963 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
GPN3-206ENST00000549963 ZC3H4Q9UPT8 1303 aaKnown RBP18.73■□□□□ 0.59
GPN3-206ENST00000549963 UTRNP46939 3433 aa18.72■□□□□ 0.59
GPN3-206ENST00000549963 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
GPN3-206ENST00000549963 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
GPN3-206ENST00000549963 DPY19L2Q6NUT2 758 aa18.72■□□□□ 0.59
GPN3-206ENST00000549963 EYA3Q99504 573 aa18.72■□□□□ 0.59
GPN3-206ENST00000549963 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
GPN3-206ENST00000549963 ANKRD2Q9GZV1 360 aa18.72■□□□□ 0.59
GPN3-206ENST00000549963 CHMP4BQ9H444 224 aaKnown RBP18.72■□□□□ 0.59
GPN3-206ENST00000549963 GPSM2P81274 684 aa18.71■□□□□ 0.59
GPN3-206ENST00000549963 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
GPN3-206ENST00000549963 LDHAL6AQ6ZMR3 332 aa18.71■□□□□ 0.59
GPN3-206ENST00000549963 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
GPN3-206ENST00000549963 KAZALD1Q96I82 304 aa18.71■□□□□ 0.59
GPN3-206ENST00000549963 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
GPN3-206ENST00000549963 PPIP5K2O43314 1243 aa18.7■□□□□ 0.58
GPN3-206ENST00000549963 GNAI2P04899 355 aa18.7■□□□□ 0.58
GPN3-206ENST00000549963 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
GPN3-206ENST00000549963 MEIS3Q99687 375 aa18.7■□□□□ 0.58
GPN3-206ENST00000549963 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms