RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 IARSP41252 1262 aaKnown RBP25.32■■□□□ 1.64
TUBA1C-205ENST00000549554 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
TUBA1C-205ENST00000549554 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
TUBA1C-205ENST00000549554 MIER1Q8N108 512 aa25.32■■□□□ 1.64
TUBA1C-205ENST00000549554 CDHR2Q9BYE9 1310 aa25.32■■□□□ 1.64
TUBA1C-205ENST00000549554 NEURL1BA8MQ27 555 aa25.31■■□□□ 1.64
TUBA1C-205ENST00000549554 PDE8AO60658 829 aa25.31■■□□□ 1.64
TUBA1C-205ENST00000549554 SP8Q8IXZ3 490 aa25.31■■□□□ 1.64
TUBA1C-205ENST00000549554 WDR90Q96KV7 1748 aa25.31■■□□□ 1.64
TUBA1C-205ENST00000549554 CWF19L2Q2TBE0 894 aaKnown RBP25.3■■□□□ 1.64
TUBA1C-205ENST00000549554 CCDC152Q4G0S7 254 aa25.29■■□□□ 1.64
TUBA1C-205ENST00000549554 SUPT20HQ8NEM7 779 aa25.29■■□□□ 1.64
TUBA1C-205ENST00000549554 LINS1Q8NG48 757 aa25.29■■□□□ 1.64
TUBA1C-205ENST00000549554 JDP2Q8WYK2 163 aa25.28■■□□□ 1.64
TUBA1C-205ENST00000549554 RRAGCQ9HB90 399 aa25.28■■□□□ 1.64
TUBA1C-205ENST00000549554 TOMM70O94826 608 aa25.27■■□□□ 1.64
TUBA1C-205ENST00000549554 MPNDQ8N594 471 aa25.27■■□□□ 1.64
TUBA1C-205ENST00000549554 JARID2Q92833 1246 aaPredicted RBP25.27■■□□□ 1.64
TUBA1C-205ENST00000549554 VEGFAP15692 232 aaPredicted RBP25.26■■□□□ 1.63
TUBA1C-205ENST00000549554 GCKRQ14397 625 aa25.26■■□□□ 1.63
TUBA1C-205ENST00000549554 DPP8Q6V1X1 898 aaPredicted RBP25.26■■□□□ 1.63
TUBA1C-205ENST00000549554 VPS33BQ9H267 617 aa25.26■■□□□ 1.63
TUBA1C-205ENST00000549554 LARGE2Q8N3Y3 721 aa25.25■■□□□ 1.63
TUBA1C-205ENST00000549554 CELF1Q92879 486 aaKnown RBP25.25■■□□□ 1.63
TUBA1C-205ENST00000549554 CDCA7LQ96GN5 454 aa25.25■■□□□ 1.63
TUBA1C-205ENST00000549554 UBE3BQ7Z3V4 1068 aa25.24■■□□□ 1.63
TUBA1C-205ENST00000549554 SCN4AP35499 1836 aa25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 F6X3S4 739 aa25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 H7C1W4 665 aa25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 PPIP5K2O43314 1243 aa25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 CTSWP56202 376 aa25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 RPS8P62241 208 aaKnown RBP25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 SLC51AQ86UW1 340 aa25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 RTFDC1Q9BY42 306 aaPredicted RBP25.23■■□□□ 1.63
TUBA1C-205ENST00000549554 SPEF2Q9C093 1822 aa25.22■■□□□ 1.63
TUBA1C-205ENST00000549554 NIM1KQ8IY84 436 aa25.22■■□□□ 1.63
TUBA1C-205ENST00000549554 TRMT2AQ8IZ69 625 aaKnown RBP25.22■■□□□ 1.63
TUBA1C-205ENST00000549554 RBM46Q8TBY0 533 aaKnown RBP25.22■■□□□ 1.63
TUBA1C-205ENST00000549554 FZD9O00144 591 aa25.21■■□□□ 1.63
TUBA1C-205ENST00000549554 DDNO94850 711 aaPredicted RBP25.21■■□□□ 1.63
TUBA1C-205ENST00000549554 CT47B1P0C2W7 299 aaPredicted RBP25.21■■□□□ 1.63
TUBA1C-205ENST00000549554 EIF6P56537 245 aaKnown RBP25.21■■□□□ 1.63
TUBA1C-205ENST00000549554 COL4A1P02462 1669 aa25.2■■□□□ 1.63
TUBA1C-205ENST00000549554 BEND3Q5T5X7 828 aa25.2■■□□□ 1.62
TUBA1C-205ENST00000549554 MRPL50Q8N5N7 158 aaKnown RBP25.2■■□□□ 1.62
TUBA1C-205ENST00000549554 CCDC85AQ96PX6 553 aaPredicted RBP25.2■■□□□ 1.62
TUBA1C-205ENST00000549554 CDC5LQ99459 802 aaKnown RBP25.2■■□□□ 1.62
TUBA1C-205ENST00000549554 SEC31BQ9NQW1 1179 aa25.2■■□□□ 1.62
TUBA1C-205ENST00000549554 RTL9Q8NET4 1388 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 DUOX1Q9NRD9 1551 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 PTPRCP08575 1304 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 AOC3Q16853 763 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 ALDH1L2Q3SY69 923 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 ANKRD18AQ8IVF6 992 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 PLA2G12BQ9BX93 195 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 COL4A5P29400 1685 aa25.19■■□□□ 1.62
TUBA1C-205ENST00000549554 LTBP1Q14766 1721 aa25.18■■□□□ 1.62
TUBA1C-205ENST00000549554 IQCA1LA6NCM1 817 aa25.18■■□□□ 1.62
TUBA1C-205ENST00000549554 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
TUBA1C-205ENST00000549554 TTLL11Q8NHH1 800 aa25.18■■□□□ 1.62
TUBA1C-205ENST00000549554 NSFL1CQ9UNZ2 370 aaKnown RBP25.18■■□□□ 1.62
TUBA1C-205ENST00000549554 ALDH1L1O75891 902 aa25.17■■□□□ 1.62
TUBA1C-205ENST00000549554 GPC2Q8N158 579 aa25.17■■□□□ 1.62
TUBA1C-205ENST00000549554 SSH1Q8WYL5 1049 aa25.17■■□□□ 1.62
TUBA1C-205ENST00000549554 L3MBTL3Q96JM7 780 aaPredicted RBP25.17■■□□□ 1.62
TUBA1C-205ENST00000549554 CASP7P55210 303 aa25.16■■□□□ 1.62
TUBA1C-205ENST00000549554 KIAA2012Q0VF49 1180 aa25.16■■□□□ 1.62
TUBA1C-205ENST00000549554 FSTL1Q12841 308 aa25.16■■□□□ 1.62
TUBA1C-205ENST00000549554 SRCIN1Q9C0H9 1055 aa25.16■■□□□ 1.62
TUBA1C-205ENST00000549554 POTECB2RU33 542 aa25.15■■□□□ 1.62
TUBA1C-205ENST00000549554 SMC1BQ8NDV3 1235 aa25.15■■□□□ 1.62
TUBA1C-205ENST00000549554 EYA3Q99504 573 aa25.15■■□□□ 1.62
TUBA1C-205ENST00000549554 GREM2Q9H772 168 aa25.15■■□□□ 1.62
TUBA1C-205ENST00000549554 SMC4Q9NTJ3 1288 aa25.15■■□□□ 1.62
TUBA1C-205ENST00000549554 C6orf229H3BNL8 230 aa25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 HSPA6P17066 643 aa25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 GPSM2P81274 684 aa25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 HNRNPUQ00839 825 aaKnown RBP eCLIP25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 BCL2L13Q9BXK5 485 aa25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 C9orf78Q9NZ63 289 aaPredicted RBP25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 ZNRF3Q9ULT6 936 aa25.14■■□□□ 1.62
TUBA1C-205ENST00000549554 GRM8O00222 908 aa25.13■■□□□ 1.61
TUBA1C-205ENST00000549554 WASHC4Q2M389 1173 aa25.13■■□□□ 1.61
TUBA1C-205ENST00000549554 ANKIB1Q9P2G1 1089 aa25.13■■□□□ 1.61
TUBA1C-205ENST00000549554 GJA3Q9Y6H8 435 aa25.13■■□□□ 1.61
TUBA1C-205ENST00000549554 PODXL2Q9NZ53 605 aa25.12■■□□□ 1.61
TUBA1C-205ENST00000549554 HACL1Q9UJ83 578 aa25.12■■□□□ 1.61
TUBA1C-205ENST00000549554 IGHMBP2P38935 993 aaKnown RBP25.11■■□□□ 1.61
TUBA1C-205ENST00000549554 XDHP47989 1333 aa25.11■■□□□ 1.61
TUBA1C-205ENST00000549554 CSF1RP07333 972 aa25.1■■□□□ 1.61
TUBA1C-205ENST00000549554 LMOD1P29536 600 aaPredicted RBP25.1■■□□□ 1.61
TUBA1C-205ENST00000549554 TBC1D16Q8TBP0 767 aa25.1■■□□□ 1.61
TUBA1C-205ENST00000549554 BSDC1Q9NW68 430 aaPredicted RBP25.1■■□□□ 1.61
TUBA1C-205ENST00000549554 GGA1Q9UJY5 639 aa25.1■■□□□ 1.61
TUBA1C-205ENST00000549554 UFL1O94874 794 aa25.09■■□□□ 1.61
TUBA1C-205ENST00000549554 ITGA6P23229 1130 aa25.09■■□□□ 1.61
TUBA1C-205ENST00000549554 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
TUBA1C-205ENST00000549554 TAF1DQ9H5J8 278 aaPredicted RBP25.09■■□□□ 1.61
TUBA1C-205ENST00000549554 POLLQ9UGP5 575 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms