RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 GREM2Q9H772 168 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
PKP2-206ENST00000549461 SLC10A5Q5PT55 438 aa11.66□□□□□ -0.54
PKP2-206ENST00000549461 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
PKP2-206ENST00000549461 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
PKP2-206ENST00000549461 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
PKP2-206ENST00000549461 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
PKP2-206ENST00000549461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
PKP2-206ENST00000549461 APBB1O00213 710 aa11.65□□□□□ -0.54
PKP2-206ENST00000549461 SIL1Q9H173 461 aa11.65□□□□□ -0.54
PKP2-206ENST00000549461 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
PKP2-206ENST00000549461 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
PKP2-206ENST00000549461 ANKRD31Q8N7Z5 1873 aa11.65□□□□□ -0.54
PKP2-206ENST00000549461 MYH3P11055 1940 aa11.64□□□□□ -0.55
PKP2-206ENST00000549461 NPHP1O15259 732 aa11.64□□□□□ -0.55
PKP2-206ENST00000549461 PTPN12Q05209 780 aaKnown RBP11.64□□□□□ -0.55
PKP2-206ENST00000549461 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
PKP2-206ENST00000549461 SMC5Q8IY18 1101 aa11.64□□□□□ -0.55
PKP2-206ENST00000549461 HDAC5Q9UQL6 1122 aa11.64□□□□□ -0.55
PKP2-206ENST00000549461 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
PKP2-206ENST00000549461 TAF1P21675 1872 aa11.63□□□□□ -0.55
PKP2-206ENST00000549461 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
PKP2-206ENST00000549461 HMMRO75330 724 aa11.63□□□□□ -0.55
PKP2-206ENST00000549461 SURF6O75683 361 aaKnown RBP11.63□□□□□ -0.55
PKP2-206ENST00000549461 ITGA6P23229 1130 aa11.63□□□□□ -0.55
PKP2-206ENST00000549461 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
PKP2-206ENST00000549461 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
PKP2-206ENST00000549461 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
PKP2-206ENST00000549461 RIC1Q4ADV7 1423 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 LRP5O75197 1615 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 ST5P78524 1137 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 NLRP3Q96P20 1036 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 COPRSQ9NQ92 184 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
PKP2-206ENST00000549461 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
PKP2-206ENST00000549461 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
PKP2-206ENST00000549461 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 SASH1O94885 1247 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 PDE4AP27815 886 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 NUCB1Q02818 461 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
PKP2-206ENST00000549461 CCDC57Q2TAC2 916 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 ANKRD45Q5TZF3 282 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
PKP2-206ENST00000549461 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 MTFR1LQ9H019 292 aa11.61□□□□□ -0.55
PKP2-206ENST00000549461 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 KLRG2A4D1S0 409 aaPredicted RBP11.6□□□□□ -0.55
PKP2-206ENST00000549461 CRY2Q49AN0 593 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 C16orf71Q8IYS4 520 aaPredicted RBP11.6□□□□□ -0.55
PKP2-206ENST00000549461 OTUD7AQ8TE49 926 aaPredicted RBP11.6□□□□□ -0.55
PKP2-206ENST00000549461 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 LNPKQ9C0E8 428 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 IL1RAPL2Q9NP60 686 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
PKP2-206ENST00000549461 CHRNA5P30532 468 aa11.59□□□□□ -0.55
PKP2-206ENST00000549461 PTGER2P43116 358 aa11.59□□□□□ -0.55
PKP2-206ENST00000549461 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
PKP2-206ENST00000549461 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
PKP2-206ENST00000549461 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
PKP2-206ENST00000549461 EYA2O00167 538 aa11.58□□□□□ -0.56
PKP2-206ENST00000549461 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.56
PKP2-206ENST00000549461 TFCP2Q12800 502 aa11.58□□□□□ -0.56
PKP2-206ENST00000549461 G3BP1Q13283 466 aaKnown RBP eCLIP11.58□□□□□ -0.56
PKP2-206ENST00000549461 OS9Q13438 667 aaPredicted RBP11.58□□□□□ -0.56
PKP2-206ENST00000549461 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
PKP2-206ENST00000549461 LDHAL6AQ6ZMR3 332 aa11.58□□□□□ -0.56
PKP2-206ENST00000549461 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
PKP2-206ENST00000549461 SNAP23O00161 211 aa11.57□□□□□ -0.56
PKP2-206ENST00000549461 RAB11FIP3O75154 756 aa11.57□□□□□ -0.56
PKP2-206ENST00000549461 SRGNP10124 158 aa11.57□□□□□ -0.56
PKP2-206ENST00000549461 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
PKP2-206ENST00000549461 C2CD5Q86YS7 1000 aa11.57□□□□□ -0.56
PKP2-206ENST00000549461 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
PKP2-206ENST00000549461 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
PKP2-206ENST00000549461 CIAO1O76071 339 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
PKP2-206ENST00000549461 RGS3P49796 1198 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 GRAPQ13588 217 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 VGLL2Q8N8G2 317 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 HELBQ8NG08 1087 aaPredicted RBP11.56□□□□□ -0.56
PKP2-206ENST00000549461 GRAPLQ8TC17 118 aaPredicted RBP11.56□□□□□ -0.56
PKP2-206ENST00000549461 RPGRQ92834 1020 aaKnown RBP11.56□□□□□ -0.56
PKP2-206ENST00000549461 KIF1BPQ96EK5 621 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
PKP2-206ENST00000549461 CNNM1Q9NRU3 951 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 TLR7Q9NYK1 1049 aaKnown RBP11.56□□□□□ -0.56
PKP2-206ENST00000549461 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
PKP2-206ENST00000549461 A0A0G2JLW4 131 aa11.55□□□□□ -0.56
PKP2-206ENST00000549461 SOCS7O14512 581 aa11.55□□□□□ -0.56
PKP2-206ENST00000549461 TAF5LO75529 589 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms